Gene : Cagra.1415s0004 C. grandiflora v1.1
Defline:  (1 of 2) PF01987 - Mitochondrial biogenesis AIM24 (AIM24) Genomic Order:  4
Name:  ? Cagra.1415s0004 Secondary Identifier:  ? PAC:28904563
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1415s0004 0.5kb upstream 0.5kb upstream 2684 true Scaffold1415: 14016-16699 Capsella grandiflora
Cagra.1415s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1415: 14016-14515 Capsella grandiflora
Cagra.1415s0004 0.5kb downstream 0.5kb downstream 2684 true Scaffold1415: 14516-17199 Capsella grandiflora
Cagra.1415s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1415: 16700-17199 Capsella grandiflora
Cagra.1415s0004 1.0kb upstream 1.0kb upstream 3184 true Scaffold1415: 13516-16699 Capsella grandiflora
Cagra.1415s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1415: 13516-14515 Capsella grandiflora
Cagra.1415s0004 1.0kb downstream 1.0kb downstream 3184 true Scaffold1415: 14516-17699 Capsella grandiflora
Cagra.1415s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1415: 16700-17699 Capsella grandiflora
Cagra.1415s0004 2.0kb upstream 2.0kb upstream 4184 true Scaffold1415: 12516-16699 Capsella grandiflora
Cagra.1415s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1415: 12516-14515 Capsella grandiflora
Cagra.1415s0004 2.0kb downstream 2.0kb downstream 4184 true Scaffold1415: 14516-18699 Capsella grandiflora
Cagra.1415s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1415: 16700-18699 Capsella grandiflora
Cagra.1415s0004 5.0kb upstream 5.0kb upstream 7184 true Scaffold1415: 9516-16699 Capsella grandiflora
Cagra.1415s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1415: 9516-14515 Capsella grandiflora
Cagra.1415s0004 5.0kb downstream 5.0kb downstream 7184 true Scaffold1415: 14516-21699 Capsella grandiflora
Cagra.1415s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1415: 16700-21699 Capsella grandiflora
Cagra.1415s0004 10.0kb upstream 10.0kb upstream 12184 true Scaffold1415: 4516-16699 Capsella grandiflora
Cagra.1415s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1415: 4516-14515 Capsella grandiflora
Cagra.1415s0004 10.0kb downstream 10.0kb downstream 12184 true Scaffold1415: 14516-26699 Capsella grandiflora
Cagra.1415s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1415: 16700-26699 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364753 5261 Brassicaceae View MSA
123830385 5264 Brassicales-Malvales View MSA
124341372 5266 SBM View MSA
124248023 5268 Malvidae View MSA
124067362 5270 Rosid View MSA
123753583 5271 Pentapetalae View MSA
122791584 5272 Eudicot View MSA
122043838 5273 Angiosperm View MSA
121310198 5274 Embryophyte View MSA
123347756 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain