Gene : Cagra.1415s0012 C. grandiflora v1.1
Defline:  (1 of 2) PTHR13402 - RGPR-RELATED Genomic Order:  12
Name:  ? Cagra.1415s0012 Secondary Identifier:  ? PAC:28904565
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1415s0012 0.5kb upstream 0.5kb upstream 6977 true Scaffold1415: 36313-43289 Capsella grandiflora
Cagra.1415s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold1415: 36313-36812 Capsella grandiflora
Cagra.1415s0012 0.5kb downstream 0.5kb downstream 6977 true Scaffold1415: 36813-43789 Capsella grandiflora
Cagra.1415s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold1415: 43290-43789 Capsella grandiflora
Cagra.1415s0012 1.0kb upstream 1.0kb upstream 7477 true Scaffold1415: 35813-43289 Capsella grandiflora
Cagra.1415s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold1415: 35813-36812 Capsella grandiflora
Cagra.1415s0012 1.0kb downstream 1.0kb downstream 7477 true Scaffold1415: 36813-44289 Capsella grandiflora
Cagra.1415s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold1415: 43290-44289 Capsella grandiflora
Cagra.1415s0012 2.0kb upstream 2.0kb upstream 8477 true Scaffold1415: 34813-43289 Capsella grandiflora
Cagra.1415s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold1415: 34813-36812 Capsella grandiflora
Cagra.1415s0012 2.0kb downstream 2.0kb downstream 8477 true Scaffold1415: 36813-45289 Capsella grandiflora
Cagra.1415s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold1415: 43290-45289 Capsella grandiflora
Cagra.1415s0012 5.0kb upstream 5.0kb upstream 11477 true Scaffold1415: 31813-43289 Capsella grandiflora
Cagra.1415s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold1415: 31813-36812 Capsella grandiflora
Cagra.1415s0012 5.0kb downstream 5.0kb downstream 11477 true Scaffold1415: 36813-48289 Capsella grandiflora
Cagra.1415s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold1415: 43290-48289 Capsella grandiflora
Cagra.1415s0012 10.0kb upstream 10.0kb upstream 16477 true Scaffold1415: 26813-43289 Capsella grandiflora
Cagra.1415s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold1415: 26813-36812 Capsella grandiflora
Cagra.1415s0012 10.0kb downstream 10.0kb downstream 16477 true Scaffold1415: 36813-53289 Capsella grandiflora
Cagra.1415s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold1415: 43290-53289 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375628 5261 Brassicaceae View MSA
123829869 5264 Brassicales-Malvales View MSA
124339494 5266 SBM View MSA
124254140 5268 Malvidae View MSA
124072884 5270 Rosid View MSA
123746128 5271 Pentapetalae View MSA
122793039 5272 Eudicot View MSA
122051498 5273 Angiosperm View MSA
121349781 5274 Embryophyte View MSA
123425826 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain