Gene : Cagra.1383s0044 C. grandiflora v1.1
Defline:  (1 of 1) PF02140//PF02449//PF02837 - Galactose binding lectin domain (Gal_Lectin) // Beta-galactosidase (Glyco_hydro_42) // Glycosyl hydrolases family 2, sugar binding domain (Glyco_hydro_2_N) Genomic Order:  44
Name:  ? Cagra.1383s0044 Secondary Identifier:  ? PAC:28901769
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1383s0044 0.5kb upstream 0.5kb upstream 4656 true Scaffold1383: 141591-146246 Capsella grandiflora
Cagra.1383s0044 0.5kb upstream 0.5kb upstream 500 false Scaffold1383: 141591-142090 Capsella grandiflora
Cagra.1383s0044 0.5kb downstream 0.5kb downstream 4656 true Scaffold1383: 142091-146746 Capsella grandiflora
Cagra.1383s0044 0.5kb downstream 0.5kb downstream 500 false Scaffold1383: 146247-146746 Capsella grandiflora
Cagra.1383s0044 1.0kb upstream 1.0kb upstream 5156 true Scaffold1383: 141091-146246 Capsella grandiflora
Cagra.1383s0044 1.0kb upstream 1.0kb upstream 1000 false Scaffold1383: 141091-142090 Capsella grandiflora
Cagra.1383s0044 1.0kb downstream 1.0kb downstream 5156 true Scaffold1383: 142091-147246 Capsella grandiflora
Cagra.1383s0044 1.0kb downstream 1.0kb downstream 1000 false Scaffold1383: 146247-147246 Capsella grandiflora
Cagra.1383s0044 2.0kb upstream 2.0kb upstream 6156 true Scaffold1383: 140091-146246 Capsella grandiflora
Cagra.1383s0044 2.0kb upstream 2.0kb upstream 2000 false Scaffold1383: 140091-142090 Capsella grandiflora
Cagra.1383s0044 2.0kb downstream 2.0kb downstream 6156 true Scaffold1383: 142091-148246 Capsella grandiflora
Cagra.1383s0044 2.0kb downstream 2.0kb downstream 2000 false Scaffold1383: 146247-148246 Capsella grandiflora
Cagra.1383s0044 5.0kb upstream 5.0kb upstream 9156 true Scaffold1383: 137091-146246 Capsella grandiflora
Cagra.1383s0044 5.0kb upstream 5.0kb upstream 5000 false Scaffold1383: 137091-142090 Capsella grandiflora
Cagra.1383s0044 5.0kb downstream 5.0kb downstream 9156 true Scaffold1383: 142091-151246 Capsella grandiflora
Cagra.1383s0044 5.0kb downstream 5.0kb downstream 5000 false Scaffold1383: 146247-151246 Capsella grandiflora
Cagra.1383s0044 10.0kb upstream 10.0kb upstream 14156 true Scaffold1383: 132091-146246 Capsella grandiflora
Cagra.1383s0044 10.0kb upstream 10.0kb upstream 10000 false Scaffold1383: 132091-142090 Capsella grandiflora
Cagra.1383s0044 10.0kb downstream 10.0kb downstream 14156 true Scaffold1383: 142091-156246 Capsella grandiflora
Cagra.1383s0044 10.0kb downstream 10.0kb downstream 10000 false Scaffold1383: 146247-156246 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380306 5261 Brassicaceae View MSA
123839927 5264 Brassicales-Malvales View MSA
124341011 5266 SBM View MSA
124247023 5268 Malvidae View MSA
124073107 5270 Rosid View MSA
123750727 5271 Pentapetalae View MSA
122791084 5272 Eudicot View MSA
122042357 5273 Angiosperm View MSA
121309952 5274 Embryophyte View MSA
123347574 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain