Gene : Cagra.1383s0060 C. grandiflora v1.1
Defline:  (1 of 2) 2.4.2.28 - S-methyl-5'-thioadenosine phosphorylase / MTAPase Genomic Order:  60
Name:  ? Cagra.1383s0060 Secondary Identifier:  ? PAC:28901765
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6756 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1383s0060 0.5kb upstream 0.5kb upstream 2473 true Scaffold1383: 209183-211655 Capsella grandiflora
Cagra.1383s0060 0.5kb upstream 0.5kb upstream 500 false Scaffold1383: 211156-211655 Capsella grandiflora
Cagra.1383s0060 0.5kb downstream 0.5kb downstream 2473 true Scaffold1383: 208683-211155 Capsella grandiflora
Cagra.1383s0060 0.5kb downstream 0.5kb downstream 500 false Scaffold1383: 208683-209182 Capsella grandiflora
Cagra.1383s0060 1.0kb upstream 1.0kb upstream 2973 true Scaffold1383: 209183-212155 Capsella grandiflora
Cagra.1383s0060 1.0kb upstream 1.0kb upstream 1000 false Scaffold1383: 211156-212155 Capsella grandiflora
Cagra.1383s0060 1.0kb downstream 1.0kb downstream 2973 true Scaffold1383: 208183-211155 Capsella grandiflora
Cagra.1383s0060 1.0kb downstream 1.0kb downstream 1000 false Scaffold1383: 208183-209182 Capsella grandiflora
Cagra.1383s0060 2.0kb upstream 2.0kb upstream 3973 true Scaffold1383: 209183-213155 Capsella grandiflora
Cagra.1383s0060 2.0kb upstream 2.0kb upstream 2000 false Scaffold1383: 211156-213155 Capsella grandiflora
Cagra.1383s0060 2.0kb downstream 2.0kb downstream 3973 true Scaffold1383: 207183-211155 Capsella grandiflora
Cagra.1383s0060 2.0kb downstream 2.0kb downstream 2000 false Scaffold1383: 207183-209182 Capsella grandiflora
Cagra.1383s0060 5.0kb upstream 5.0kb upstream 6973 true Scaffold1383: 209183-216155 Capsella grandiflora
Cagra.1383s0060 5.0kb upstream 5.0kb upstream 5000 false Scaffold1383: 211156-216155 Capsella grandiflora
Cagra.1383s0060 5.0kb downstream 5.0kb downstream 6973 true Scaffold1383: 204183-211155 Capsella grandiflora
Cagra.1383s0060 5.0kb downstream 5.0kb downstream 5000 false Scaffold1383: 204183-209182 Capsella grandiflora
Cagra.1383s0060 10.0kb upstream 10.0kb upstream 11973 true Scaffold1383: 209183-221155 Capsella grandiflora
Cagra.1383s0060 10.0kb upstream 10.0kb upstream 10000 false Scaffold1383: 211156-221155 Capsella grandiflora
Cagra.1383s0060 10.0kb downstream 10.0kb downstream 11973 true Scaffold1383: 199183-211155 Capsella grandiflora
Cagra.1383s0060 10.0kb downstream 10.0kb downstream 10000 false Scaffold1383: 199183-209182 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361237 5261 Brassicaceae View MSA
123837274 5264 Brassicales-Malvales View MSA
124343945 5266 SBM View MSA
124243713 5268 Malvidae View MSA
124068353 5270 Rosid View MSA
123747055 5271 Pentapetalae View MSA
122790949 5272 Eudicot View MSA
122046181 5273 Angiosperm View MSA
121344048 5274 Embryophyte View MSA
123424569 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain