Gene : Cagra.1383s0069 C. grandiflora v1.1
Defline:  (1 of 1) 1.3.1.89 - tRNA-dihydrouridine(47) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 3 Genomic Order:  69
Name:  ? Cagra.1383s0069 Secondary Identifier:  ? PAC:28901751
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1383s0069 0.5kb upstream 0.5kb upstream 3969 true Scaffold1383: 232905-236873 Capsella grandiflora
Cagra.1383s0069 0.5kb upstream 0.5kb upstream 500 false Scaffold1383: 236374-236873 Capsella grandiflora
Cagra.1383s0069 0.5kb downstream 0.5kb downstream 3969 true Scaffold1383: 232405-236373 Capsella grandiflora
Cagra.1383s0069 0.5kb downstream 0.5kb downstream 500 false Scaffold1383: 232405-232904 Capsella grandiflora
Cagra.1383s0069 1.0kb upstream 1.0kb upstream 4469 true Scaffold1383: 232905-237373 Capsella grandiflora
Cagra.1383s0069 1.0kb upstream 1.0kb upstream 1000 false Scaffold1383: 236374-237373 Capsella grandiflora
Cagra.1383s0069 1.0kb downstream 1.0kb downstream 4469 true Scaffold1383: 231905-236373 Capsella grandiflora
Cagra.1383s0069 1.0kb downstream 1.0kb downstream 1000 false Scaffold1383: 231905-232904 Capsella grandiflora
Cagra.1383s0069 2.0kb upstream 2.0kb upstream 5469 true Scaffold1383: 232905-238373 Capsella grandiflora
Cagra.1383s0069 2.0kb upstream 2.0kb upstream 2000 false Scaffold1383: 236374-238373 Capsella grandiflora
Cagra.1383s0069 2.0kb downstream 2.0kb downstream 5469 true Scaffold1383: 230905-236373 Capsella grandiflora
Cagra.1383s0069 2.0kb downstream 2.0kb downstream 2000 false Scaffold1383: 230905-232904 Capsella grandiflora
Cagra.1383s0069 5.0kb upstream 5.0kb upstream 8469 true Scaffold1383: 232905-241373 Capsella grandiflora
Cagra.1383s0069 5.0kb upstream 5.0kb upstream 5000 false Scaffold1383: 236374-241373 Capsella grandiflora
Cagra.1383s0069 5.0kb downstream 5.0kb downstream 8469 true Scaffold1383: 227905-236373 Capsella grandiflora
Cagra.1383s0069 5.0kb downstream 5.0kb downstream 5000 false Scaffold1383: 227905-232904 Capsella grandiflora
Cagra.1383s0069 10.0kb upstream 10.0kb upstream 13469 true Scaffold1383: 232905-246373 Capsella grandiflora
Cagra.1383s0069 10.0kb upstream 10.0kb upstream 10000 false Scaffold1383: 236374-246373 Capsella grandiflora
Cagra.1383s0069 10.0kb downstream 10.0kb downstream 13469 true Scaffold1383: 222905-236373 Capsella grandiflora
Cagra.1383s0069 10.0kb downstream 10.0kb downstream 10000 false Scaffold1383: 222905-232904 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364066 5261 Brassicaceae View MSA
123832370 5264 Brassicales-Malvales View MSA
124337121 5266 SBM View MSA
124242197 5268 Malvidae View MSA
124062721 5270 Rosid View MSA
123739972 5271 Pentapetalae View MSA
122787852 5272 Eudicot View MSA
122047874 5273 Angiosperm View MSA
121343819 5274 Embryophyte View MSA
123428585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain