Gene : Cagra.1390s0021 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24326:SF264 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-20-RELATED Genomic Order:  21
Name:  ? Cagra.1390s0021 Secondary Identifier:  ? PAC:28907322
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1390s0021 0.5kb upstream 0.5kb upstream 2322 true Scaffold1390: 61565-63886 Capsella grandiflora
Cagra.1390s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold1390: 61565-62064 Capsella grandiflora
Cagra.1390s0021 0.5kb downstream 0.5kb downstream 2322 true Scaffold1390: 62065-64386 Capsella grandiflora
Cagra.1390s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold1390: 63887-64386 Capsella grandiflora
Cagra.1390s0021 1.0kb upstream 1.0kb upstream 2822 true Scaffold1390: 61065-63886 Capsella grandiflora
Cagra.1390s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold1390: 61065-62064 Capsella grandiflora
Cagra.1390s0021 1.0kb downstream 1.0kb downstream 2822 true Scaffold1390: 62065-64886 Capsella grandiflora
Cagra.1390s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold1390: 63887-64886 Capsella grandiflora
Cagra.1390s0021 2.0kb upstream 2.0kb upstream 3822 true Scaffold1390: 60065-63886 Capsella grandiflora
Cagra.1390s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold1390: 60065-62064 Capsella grandiflora
Cagra.1390s0021 2.0kb downstream 2.0kb downstream 3822 true Scaffold1390: 62065-65886 Capsella grandiflora
Cagra.1390s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold1390: 63887-65886 Capsella grandiflora
Cagra.1390s0021 5.0kb upstream 5.0kb upstream 6822 true Scaffold1390: 57065-63886 Capsella grandiflora
Cagra.1390s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold1390: 57065-62064 Capsella grandiflora
Cagra.1390s0021 5.0kb downstream 5.0kb downstream 6822 true Scaffold1390: 62065-68886 Capsella grandiflora
Cagra.1390s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold1390: 63887-68886 Capsella grandiflora
Cagra.1390s0021 10.0kb upstream 10.0kb upstream 11822 true Scaffold1390: 52065-63886 Capsella grandiflora
Cagra.1390s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold1390: 52065-62064 Capsella grandiflora
Cagra.1390s0021 10.0kb downstream 10.0kb downstream 11822 true Scaffold1390: 62065-73886 Capsella grandiflora
Cagra.1390s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold1390: 63887-73886 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368798 5261 Brassicaceae View MSA
123837312 5264 Brassicales-Malvales View MSA
124343969 5266 SBM View MSA
124251530 5268 Malvidae View MSA
124071731 5270 Rosid View MSA
123747120 5271 Pentapetalae View MSA
122786437 5272 Eudicot View MSA
122042617 5273 Angiosperm View MSA
121351579 5274 Embryophyte View MSA
123382235 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain