Gene : Cagra.1390s0027 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10264:SF90 - HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 3 Genomic Order:  27
Name:  ? Cagra.1390s0027 Secondary Identifier:  ? PAC:28907292
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1390s0027 0.5kb upstream 0.5kb upstream 1990 true Scaffold1390: 74571-76560 Capsella grandiflora
Cagra.1390s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold1390: 76061-76560 Capsella grandiflora
Cagra.1390s0027 0.5kb downstream 0.5kb downstream 1990 true Scaffold1390: 74071-76060 Capsella grandiflora
Cagra.1390s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold1390: 74071-74570 Capsella grandiflora
Cagra.1390s0027 1.0kb upstream 1.0kb upstream 2490 true Scaffold1390: 74571-77060 Capsella grandiflora
Cagra.1390s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold1390: 76061-77060 Capsella grandiflora
Cagra.1390s0027 1.0kb downstream 1.0kb downstream 2490 true Scaffold1390: 73571-76060 Capsella grandiflora
Cagra.1390s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold1390: 73571-74570 Capsella grandiflora
Cagra.1390s0027 2.0kb upstream 2.0kb upstream 3490 true Scaffold1390: 74571-78060 Capsella grandiflora
Cagra.1390s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold1390: 76061-78060 Capsella grandiflora
Cagra.1390s0027 2.0kb downstream 2.0kb downstream 3490 true Scaffold1390: 72571-76060 Capsella grandiflora
Cagra.1390s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold1390: 72571-74570 Capsella grandiflora
Cagra.1390s0027 5.0kb upstream 5.0kb upstream 6490 true Scaffold1390: 74571-81060 Capsella grandiflora
Cagra.1390s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold1390: 76061-81060 Capsella grandiflora
Cagra.1390s0027 5.0kb downstream 5.0kb downstream 6490 true Scaffold1390: 69571-76060 Capsella grandiflora
Cagra.1390s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold1390: 69571-74570 Capsella grandiflora
Cagra.1390s0027 10.0kb upstream 10.0kb upstream 11490 true Scaffold1390: 74571-86060 Capsella grandiflora
Cagra.1390s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold1390: 76061-86060 Capsella grandiflora
Cagra.1390s0027 10.0kb downstream 10.0kb downstream 11490 true Scaffold1390: 64571-76060 Capsella grandiflora
Cagra.1390s0027 10.0kb downstream 10.0kb downstream 10000 false Scaffold1390: 64571-74570 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027594 5273 Angiosperm View MSA
122363639 5261 Brassicaceae View MSA
123798584 5264 Brassicales-Malvales View MSA
124296200 5266 SBM View MSA
124252159 5268 Malvidae View MSA
124052393 5270 Rosid View MSA
123752499 5271 Pentapetalae View MSA
122798658 5272 Eudicot View MSA
121348601 5274 Embryophyte View MSA
123427890 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain