Gene : Cagra.1390s0030 C. grandiflora v1.1
Defline:  (1 of 5) PF04601 - Domain of unknown function (DUF569) (DUF569) Genomic Order:  30
Name:  ? Cagra.1390s0030 Secondary Identifier:  ? PAC:28907293
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1390s0030 0.5kb upstream 0.5kb upstream 1631 true Scaffold1390: 90451-92081 Capsella grandiflora
Cagra.1390s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold1390: 91582-92081 Capsella grandiflora
Cagra.1390s0030 0.5kb downstream 0.5kb downstream 1631 true Scaffold1390: 89951-91581 Capsella grandiflora
Cagra.1390s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold1390: 89951-90450 Capsella grandiflora
Cagra.1390s0030 1.0kb upstream 1.0kb upstream 2131 true Scaffold1390: 90451-92581 Capsella grandiflora
Cagra.1390s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold1390: 91582-92581 Capsella grandiflora
Cagra.1390s0030 1.0kb downstream 1.0kb downstream 2131 true Scaffold1390: 89451-91581 Capsella grandiflora
Cagra.1390s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold1390: 89451-90450 Capsella grandiflora
Cagra.1390s0030 2.0kb upstream 2.0kb upstream 3131 true Scaffold1390: 90451-93581 Capsella grandiflora
Cagra.1390s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold1390: 91582-93581 Capsella grandiflora
Cagra.1390s0030 2.0kb downstream 2.0kb downstream 3131 true Scaffold1390: 88451-91581 Capsella grandiflora
Cagra.1390s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold1390: 88451-90450 Capsella grandiflora
Cagra.1390s0030 5.0kb upstream 5.0kb upstream 6131 true Scaffold1390: 90451-96581 Capsella grandiflora
Cagra.1390s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold1390: 91582-96581 Capsella grandiflora
Cagra.1390s0030 5.0kb downstream 5.0kb downstream 6131 true Scaffold1390: 85451-91581 Capsella grandiflora
Cagra.1390s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold1390: 85451-90450 Capsella grandiflora
Cagra.1390s0030 10.0kb upstream 10.0kb upstream 11131 true Scaffold1390: 90451-101581 Capsella grandiflora
Cagra.1390s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold1390: 91582-101581 Capsella grandiflora
Cagra.1390s0030 10.0kb downstream 10.0kb downstream 11131 true Scaffold1390: 80451-91581 Capsella grandiflora
Cagra.1390s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold1390: 80451-90450 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375990 5261 Brassicaceae View MSA
123801106 5264 Brassicales-Malvales View MSA
124298444 5266 SBM View MSA
124150086 5268 Malvidae View MSA
123875768 5270 Rosid View MSA
123459540 5271 Pentapetalae View MSA
122494930 5272 Eudicot View MSA
122046577 5273 Angiosperm View MSA
121350939 5274 Embryophyte View MSA
123381941 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain