Gene : Cagra.1393s0001 C. grandiflora v1.1
Defline:  (1 of 71) PTHR32212:SF126 - EMB Genomic Order:  1
Name:  ? Cagra.1393s0001 Secondary Identifier:  ? PAC:28897733
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1393s0001 0.5kb upstream 0.5kb upstream 4569 true Scaffold1393: 2205-6773 Capsella grandiflora
Cagra.1393s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold1393: 6274-6773 Capsella grandiflora
Cagra.1393s0001 0.5kb downstream 0.5kb downstream 4569 true Scaffold1393: 1705-6273 Capsella grandiflora
Cagra.1393s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold1393: 1705-2204 Capsella grandiflora
Cagra.1393s0001 1.0kb upstream 1.0kb upstream 5069 true Scaffold1393: 2205-7273 Capsella grandiflora
Cagra.1393s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold1393: 6274-7273 Capsella grandiflora
Cagra.1393s0001 1.0kb downstream 1.0kb downstream 5069 true Scaffold1393: 1205-6273 Capsella grandiflora
Cagra.1393s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold1393: 1205-2204 Capsella grandiflora
Cagra.1393s0001 2.0kb upstream 2.0kb upstream 6069 true Scaffold1393: 2205-8273 Capsella grandiflora
Cagra.1393s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold1393: 6274-8273 Capsella grandiflora
Cagra.1393s0001 2.0kb downstream 2.0kb downstream 6069 true Scaffold1393: 205-6273 Capsella grandiflora
Cagra.1393s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold1393: 205-2204 Capsella grandiflora
Cagra.1393s0001 5.0kb upstream 5.0kb upstream 9069 true Scaffold1393: 2205-11273 Capsella grandiflora
Cagra.1393s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold1393: 6274-11273 Capsella grandiflora
Cagra.1393s0001 5.0kb downstream 5.0kb downstream 6273 true Scaffold1393: 1-6273 Capsella grandiflora
Cagra.1393s0001 5.0kb downstream 5.0kb downstream 2204 false Scaffold1393: 1-2204 Capsella grandiflora
Cagra.1393s0001 10.0kb upstream 10.0kb upstream 14069 true Scaffold1393: 2205-16273 Capsella grandiflora
Cagra.1393s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold1393: 6274-16273 Capsella grandiflora
Cagra.1393s0001 10.0kb downstream 10.0kb downstream 6273 true Scaffold1393: 1-6273 Capsella grandiflora
Cagra.1393s0001 10.0kb downstream 10.0kb downstream 2204 false Scaffold1393: 1-2204 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381481 5261 Brassicaceae View MSA
123803266 5264 Brassicales-Malvales View MSA
124300386 5266 SBM View MSA
124151578 5268 Malvidae View MSA
124073024 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain