Gene : Cagra.1397s0001 C. grandiflora v1.1
Defline:  (1 of 6) PF13650 - Aspartyl protease (Asp_protease_2) Genomic Order:  1
Name:  ? Cagra.1397s0001 Secondary Identifier:  ? PAC:28900285
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1397s0001 0.5kb upstream 0.5kb upstream 655 true Scaffold1397: 1-655 Capsella grandiflora
Cagra.1397s0001 0.5kb upstream 0.5kb upstream 93 false Scaffold1397: 1-93 Capsella grandiflora
Cagra.1397s0001 0.5kb downstream 0.5kb downstream 970 true Scaffold1397: 94-1063 Capsella grandiflora
Cagra.1397s0001 0.5kb downstream 0.5kb downstream 408 false Scaffold1397: 656-1063 Capsella grandiflora
Cagra.1397s0001 1.0kb upstream 1.0kb upstream 655 true Scaffold1397: 1-655 Capsella grandiflora
Cagra.1397s0001 1.0kb upstream 1.0kb upstream 93 false Scaffold1397: 1-93 Capsella grandiflora
Cagra.1397s0001 1.0kb downstream 1.0kb downstream 970 true Scaffold1397: 94-1063 Capsella grandiflora
Cagra.1397s0001 1.0kb downstream 1.0kb downstream 408 false Scaffold1397: 656-1063 Capsella grandiflora
Cagra.1397s0001 2.0kb upstream 2.0kb upstream 655 true Scaffold1397: 1-655 Capsella grandiflora
Cagra.1397s0001 2.0kb upstream 2.0kb upstream 93 false Scaffold1397: 1-93 Capsella grandiflora
Cagra.1397s0001 2.0kb downstream 2.0kb downstream 970 true Scaffold1397: 94-1063 Capsella grandiflora
Cagra.1397s0001 2.0kb downstream 2.0kb downstream 408 false Scaffold1397: 656-1063 Capsella grandiflora
Cagra.1397s0001 5.0kb upstream 5.0kb upstream 655 true Scaffold1397: 1-655 Capsella grandiflora
Cagra.1397s0001 5.0kb upstream 5.0kb upstream 93 false Scaffold1397: 1-93 Capsella grandiflora
Cagra.1397s0001 5.0kb downstream 5.0kb downstream 970 true Scaffold1397: 94-1063 Capsella grandiflora
Cagra.1397s0001 5.0kb downstream 5.0kb downstream 408 false Scaffold1397: 656-1063 Capsella grandiflora
Cagra.1397s0001 10.0kb upstream 10.0kb upstream 655 true Scaffold1397: 1-655 Capsella grandiflora
Cagra.1397s0001 10.0kb upstream 10.0kb upstream 93 false Scaffold1397: 1-93 Capsella grandiflora
Cagra.1397s0001 10.0kb downstream 10.0kb downstream 970 true Scaffold1397: 94-1063 Capsella grandiflora
Cagra.1397s0001 10.0kb downstream 10.0kb downstream 408 false Scaffold1397: 656-1063 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028911 5273 Angiosperm View MSA
122332560 5261 Brassicaceae Singleton cluster - no MSA
123773618 5264 Brassicales-Malvales Singleton cluster - no MSA
124272092 5266 SBM Singleton cluster - no MSA
124127982 5268 Malvidae Singleton cluster - no MSA
123856764 5270 Rosid Singleton cluster - no MSA
123753436 5271 Pentapetalae View MSA
122775104 5272 Eudicot View MSA
121298339 5274 Embryophyte View MSA
123336316 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain