Gene : Cagra.1372s0030 C. grandiflora v1.1
Defline:  (1 of 2) PTHR13943:SF32 - NC DOMAIN-CONTAINING PROTEIN-LIKE PROTEIN Genomic Order:  30
Name:  ? Cagra.1372s0030 Secondary Identifier:  ? PAC:28907346
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1372s0030 0.5kb upstream 0.5kb upstream 2566 true Scaffold1372: 98200-100765 Capsella grandiflora
Cagra.1372s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold1372: 100266-100765 Capsella grandiflora
Cagra.1372s0030 0.5kb downstream 0.5kb downstream 2566 true Scaffold1372: 97700-100265 Capsella grandiflora
Cagra.1372s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold1372: 97700-98199 Capsella grandiflora
Cagra.1372s0030 1.0kb upstream 1.0kb upstream 3066 true Scaffold1372: 98200-101265 Capsella grandiflora
Cagra.1372s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold1372: 100266-101265 Capsella grandiflora
Cagra.1372s0030 1.0kb downstream 1.0kb downstream 3066 true Scaffold1372: 97200-100265 Capsella grandiflora
Cagra.1372s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold1372: 97200-98199 Capsella grandiflora
Cagra.1372s0030 2.0kb upstream 2.0kb upstream 4066 true Scaffold1372: 98200-102265 Capsella grandiflora
Cagra.1372s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold1372: 100266-102265 Capsella grandiflora
Cagra.1372s0030 2.0kb downstream 2.0kb downstream 4066 true Scaffold1372: 96200-100265 Capsella grandiflora
Cagra.1372s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold1372: 96200-98199 Capsella grandiflora
Cagra.1372s0030 5.0kb upstream 5.0kb upstream 7066 true Scaffold1372: 98200-105265 Capsella grandiflora
Cagra.1372s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold1372: 100266-105265 Capsella grandiflora
Cagra.1372s0030 5.0kb downstream 5.0kb downstream 7066 true Scaffold1372: 93200-100265 Capsella grandiflora
Cagra.1372s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold1372: 93200-98199 Capsella grandiflora
Cagra.1372s0030 10.0kb upstream 10.0kb upstream 12066 true Scaffold1372: 98200-110265 Capsella grandiflora
Cagra.1372s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold1372: 100266-110265 Capsella grandiflora
Cagra.1372s0030 10.0kb downstream 10.0kb downstream 12066 true Scaffold1372: 88200-100265 Capsella grandiflora
Cagra.1372s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold1372: 88200-98199 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372830 5261 Brassicaceae View MSA
123838048 5264 Brassicales-Malvales View MSA
124341322 5266 SBM View MSA
124245141 5268 Malvidae View MSA
124060781 5270 Rosid View MSA
123746074 5271 Pentapetalae View MSA
122790931 5272 Eudicot View MSA
122046172 5273 Angiosperm View MSA
121351388 5274 Embryophyte View MSA
123382148 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain