Gene : Cagra.1372s0025 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12786:SF1 - PROTEIN SDE2 HOMOLOG Genomic Order:  25
Name:  ? Cagra.1372s0025 Secondary Identifier:  ? PAC:28907338
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1372s0025 0.5kb upstream 0.5kb upstream 2352 true Scaffold1372: 71844-74195 Capsella grandiflora
Cagra.1372s0025 0.5kb upstream 0.5kb upstream 500 false Scaffold1372: 71844-72343 Capsella grandiflora
Cagra.1372s0025 0.5kb downstream 0.5kb downstream 2352 true Scaffold1372: 72344-74695 Capsella grandiflora
Cagra.1372s0025 0.5kb downstream 0.5kb downstream 500 false Scaffold1372: 74196-74695 Capsella grandiflora
Cagra.1372s0025 1.0kb upstream 1.0kb upstream 2852 true Scaffold1372: 71344-74195 Capsella grandiflora
Cagra.1372s0025 1.0kb upstream 1.0kb upstream 1000 false Scaffold1372: 71344-72343 Capsella grandiflora
Cagra.1372s0025 1.0kb downstream 1.0kb downstream 2852 true Scaffold1372: 72344-75195 Capsella grandiflora
Cagra.1372s0025 1.0kb downstream 1.0kb downstream 1000 false Scaffold1372: 74196-75195 Capsella grandiflora
Cagra.1372s0025 2.0kb upstream 2.0kb upstream 3852 true Scaffold1372: 70344-74195 Capsella grandiflora
Cagra.1372s0025 2.0kb upstream 2.0kb upstream 2000 false Scaffold1372: 70344-72343 Capsella grandiflora
Cagra.1372s0025 2.0kb downstream 2.0kb downstream 3852 true Scaffold1372: 72344-76195 Capsella grandiflora
Cagra.1372s0025 2.0kb downstream 2.0kb downstream 2000 false Scaffold1372: 74196-76195 Capsella grandiflora
Cagra.1372s0025 5.0kb upstream 5.0kb upstream 6852 true Scaffold1372: 67344-74195 Capsella grandiflora
Cagra.1372s0025 5.0kb upstream 5.0kb upstream 5000 false Scaffold1372: 67344-72343 Capsella grandiflora
Cagra.1372s0025 5.0kb downstream 5.0kb downstream 6852 true Scaffold1372: 72344-79195 Capsella grandiflora
Cagra.1372s0025 5.0kb downstream 5.0kb downstream 5000 false Scaffold1372: 74196-79195 Capsella grandiflora
Cagra.1372s0025 10.0kb upstream 10.0kb upstream 11852 true Scaffold1372: 62344-74195 Capsella grandiflora
Cagra.1372s0025 10.0kb upstream 10.0kb upstream 10000 false Scaffold1372: 62344-72343 Capsella grandiflora
Cagra.1372s0025 10.0kb downstream 10.0kb downstream 11852 true Scaffold1372: 72344-84195 Capsella grandiflora
Cagra.1372s0025 10.0kb downstream 10.0kb downstream 10000 false Scaffold1372: 74196-84195 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366035 5261 Brassicaceae View MSA
123839812 5264 Brassicales-Malvales View MSA
124341955 5266 SBM View MSA
124240359 5268 Malvidae View MSA
124060916 5270 Rosid View MSA
123743945 5271 Pentapetalae View MSA
122790858 5272 Eudicot View MSA
122047648 5273 Angiosperm View MSA
121345169 5274 Embryophyte View MSA
123427367 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain