Gene : Cagra.1372s0027 C. grandiflora v1.1
Genomic Order:  27 Name:  ? Cagra.1372s0027
Secondary Identifier:  ? PAC:28907365
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1372s0027 0.5kb upstream 0.5kb upstream 1943 true Scaffold1372: 88031-89973 Capsella grandiflora
Cagra.1372s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold1372: 88031-88530 Capsella grandiflora
Cagra.1372s0027 0.5kb downstream 0.5kb downstream 1943 true Scaffold1372: 88531-90473 Capsella grandiflora
Cagra.1372s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold1372: 89974-90473 Capsella grandiflora
Cagra.1372s0027 1.0kb upstream 1.0kb upstream 2443 true Scaffold1372: 87531-89973 Capsella grandiflora
Cagra.1372s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold1372: 87531-88530 Capsella grandiflora
Cagra.1372s0027 1.0kb downstream 1.0kb downstream 2443 true Scaffold1372: 88531-90973 Capsella grandiflora
Cagra.1372s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold1372: 89974-90973 Capsella grandiflora
Cagra.1372s0027 2.0kb upstream 2.0kb upstream 3443 true Scaffold1372: 86531-89973 Capsella grandiflora
Cagra.1372s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold1372: 86531-88530 Capsella grandiflora
Cagra.1372s0027 2.0kb downstream 2.0kb downstream 3443 true Scaffold1372: 88531-91973 Capsella grandiflora
Cagra.1372s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold1372: 89974-91973 Capsella grandiflora
Cagra.1372s0027 5.0kb upstream 5.0kb upstream 6443 true Scaffold1372: 83531-89973 Capsella grandiflora
Cagra.1372s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold1372: 83531-88530 Capsella grandiflora
Cagra.1372s0027 5.0kb downstream 5.0kb downstream 6443 true Scaffold1372: 88531-94973 Capsella grandiflora
Cagra.1372s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold1372: 89974-94973 Capsella grandiflora
Cagra.1372s0027 10.0kb upstream 10.0kb upstream 11443 true Scaffold1372: 78531-89973 Capsella grandiflora
Cagra.1372s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold1372: 78531-88530 Capsella grandiflora
Cagra.1372s0027 10.0kb downstream 10.0kb downstream 11443 true Scaffold1372: 88531-99973 Capsella grandiflora
Cagra.1372s0027 10.0kb downstream 10.0kb downstream 10000 false Scaffold1372: 89974-99973 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367688 5261 Brassicaceae View MSA
123840152 5264 Brassicales-Malvales View MSA
124342129 5266 SBM View MSA
124253586 5268 Malvidae View MSA
124064528 5270 Rosid View MSA
123742018 5271 Pentapetalae View MSA
122787181 5272 Eudicot View MSA
122047790 5273 Angiosperm View MSA
121310794 5274 Embryophyte View MSA
123348192 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain