Gene : Cagra.1378s0010 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13471 - TETRATRICOPEPTIDE-LIKE HELICAL Genomic Order:  10
Name:  ? Cagra.1378s0010 Secondary Identifier:  ? PAC:28903314
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1378s0010 0.5kb upstream 0.5kb upstream 5732 true Scaffold1378: 38210-43941 Capsella grandiflora
Cagra.1378s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold1378: 38210-38709 Capsella grandiflora
Cagra.1378s0010 0.5kb downstream 0.5kb downstream 5732 true Scaffold1378: 38710-44441 Capsella grandiflora
Cagra.1378s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold1378: 43942-44441 Capsella grandiflora
Cagra.1378s0010 1.0kb upstream 1.0kb upstream 6232 true Scaffold1378: 37710-43941 Capsella grandiflora
Cagra.1378s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold1378: 37710-38709 Capsella grandiflora
Cagra.1378s0010 1.0kb downstream 1.0kb downstream 6232 true Scaffold1378: 38710-44941 Capsella grandiflora
Cagra.1378s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold1378: 43942-44941 Capsella grandiflora
Cagra.1378s0010 2.0kb upstream 2.0kb upstream 7232 true Scaffold1378: 36710-43941 Capsella grandiflora
Cagra.1378s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold1378: 36710-38709 Capsella grandiflora
Cagra.1378s0010 2.0kb downstream 2.0kb downstream 7232 true Scaffold1378: 38710-45941 Capsella grandiflora
Cagra.1378s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold1378: 43942-45941 Capsella grandiflora
Cagra.1378s0010 5.0kb upstream 5.0kb upstream 10232 true Scaffold1378: 33710-43941 Capsella grandiflora
Cagra.1378s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold1378: 33710-38709 Capsella grandiflora
Cagra.1378s0010 5.0kb downstream 5.0kb downstream 9887 true Scaffold1378: 38710-48596 Capsella grandiflora
Cagra.1378s0010 5.0kb downstream 5.0kb downstream 4655 false Scaffold1378: 43942-48596 Capsella grandiflora
Cagra.1378s0010 10.0kb upstream 10.0kb upstream 15232 true Scaffold1378: 28710-43941 Capsella grandiflora
Cagra.1378s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold1378: 28710-38709 Capsella grandiflora
Cagra.1378s0010 10.0kb downstream 10.0kb downstream 9887 true Scaffold1378: 38710-48596 Capsella grandiflora
Cagra.1378s0010 10.0kb downstream 10.0kb downstream 4655 false Scaffold1378: 43942-48596 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026294 5273 Angiosperm View MSA
122371791 5261 Brassicaceae View MSA
123831197 5264 Brassicales-Malvales View MSA
124337816 5266 SBM View MSA
124243084 5268 Malvidae View MSA
124063605 5270 Rosid View MSA
123738966 5271 Pentapetalae View MSA
122791971 5272 Eudicot View MSA
121345312 5274 Embryophyte View MSA
123423930 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain