Gene : Cagra.1383s0007 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31669:SF54 - PROTEIN FAR1-RELATED SEQUENCE 5 Genomic Order:  7
Name:  ? Cagra.1383s0007 Secondary Identifier:  ? PAC:28901795
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1383s0007 0.5kb upstream 0.5kb upstream 3926 true Scaffold1383: 19031-22956 Capsella grandiflora
Cagra.1383s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold1383: 22457-22956 Capsella grandiflora
Cagra.1383s0007 0.5kb downstream 0.5kb downstream 3926 true Scaffold1383: 18531-22456 Capsella grandiflora
Cagra.1383s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold1383: 18531-19030 Capsella grandiflora
Cagra.1383s0007 1.0kb upstream 1.0kb upstream 4426 true Scaffold1383: 19031-23456 Capsella grandiflora
Cagra.1383s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold1383: 22457-23456 Capsella grandiflora
Cagra.1383s0007 1.0kb downstream 1.0kb downstream 4426 true Scaffold1383: 18031-22456 Capsella grandiflora
Cagra.1383s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold1383: 18031-19030 Capsella grandiflora
Cagra.1383s0007 2.0kb upstream 2.0kb upstream 5426 true Scaffold1383: 19031-24456 Capsella grandiflora
Cagra.1383s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold1383: 22457-24456 Capsella grandiflora
Cagra.1383s0007 2.0kb downstream 2.0kb downstream 5426 true Scaffold1383: 17031-22456 Capsella grandiflora
Cagra.1383s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold1383: 17031-19030 Capsella grandiflora
Cagra.1383s0007 5.0kb upstream 5.0kb upstream 8426 true Scaffold1383: 19031-27456 Capsella grandiflora
Cagra.1383s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold1383: 22457-27456 Capsella grandiflora
Cagra.1383s0007 5.0kb downstream 5.0kb downstream 8426 true Scaffold1383: 14031-22456 Capsella grandiflora
Cagra.1383s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold1383: 14031-19030 Capsella grandiflora
Cagra.1383s0007 10.0kb upstream 10.0kb upstream 13426 true Scaffold1383: 19031-32456 Capsella grandiflora
Cagra.1383s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold1383: 22457-32456 Capsella grandiflora
Cagra.1383s0007 10.0kb downstream 10.0kb downstream 13426 true Scaffold1383: 9031-22456 Capsella grandiflora
Cagra.1383s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold1383: 9031-19030 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362186 5261 Brassicaceae View MSA
123833571 5264 Brassicales-Malvales View MSA
124345757 5266 SBM View MSA
124246864 5268 Malvidae View MSA
124065498 5270 Rosid View MSA
123752178 5271 Pentapetalae View MSA
122796628 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain