Gene : Cagra.1383s0016 C. grandiflora v1.1
Defline:  (1 of 1) 2.4.1.101 - Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase / 1,2-N-acetylglucosaminyltransferase Genomic Order:  16
Name:  ? Cagra.1383s0016 Secondary Identifier:  ? PAC:28901731
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7426 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1383s0016 0.5kb upstream 0.5kb upstream 4007 true Scaffold1383: 48364-52370 Capsella grandiflora
Cagra.1383s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold1383: 51871-52370 Capsella grandiflora
Cagra.1383s0016 0.5kb downstream 0.5kb downstream 4007 true Scaffold1383: 47864-51870 Capsella grandiflora
Cagra.1383s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold1383: 47864-48363 Capsella grandiflora
Cagra.1383s0016 1.0kb upstream 1.0kb upstream 4507 true Scaffold1383: 48364-52870 Capsella grandiflora
Cagra.1383s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold1383: 51871-52870 Capsella grandiflora
Cagra.1383s0016 1.0kb downstream 1.0kb downstream 4507 true Scaffold1383: 47364-51870 Capsella grandiflora
Cagra.1383s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold1383: 47364-48363 Capsella grandiflora
Cagra.1383s0016 2.0kb upstream 2.0kb upstream 5507 true Scaffold1383: 48364-53870 Capsella grandiflora
Cagra.1383s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold1383: 51871-53870 Capsella grandiflora
Cagra.1383s0016 2.0kb downstream 2.0kb downstream 5507 true Scaffold1383: 46364-51870 Capsella grandiflora
Cagra.1383s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold1383: 46364-48363 Capsella grandiflora
Cagra.1383s0016 5.0kb upstream 5.0kb upstream 8507 true Scaffold1383: 48364-56870 Capsella grandiflora
Cagra.1383s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold1383: 51871-56870 Capsella grandiflora
Cagra.1383s0016 5.0kb downstream 5.0kb downstream 8507 true Scaffold1383: 43364-51870 Capsella grandiflora
Cagra.1383s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold1383: 43364-48363 Capsella grandiflora
Cagra.1383s0016 10.0kb upstream 10.0kb upstream 13507 true Scaffold1383: 48364-61870 Capsella grandiflora
Cagra.1383s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold1383: 51871-61870 Capsella grandiflora
Cagra.1383s0016 10.0kb downstream 10.0kb downstream 13507 true Scaffold1383: 38364-51870 Capsella grandiflora
Cagra.1383s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold1383: 38364-48363 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371542 5261 Brassicaceae View MSA
123831005 5264 Brassicales-Malvales View MSA
124342265 5266 SBM View MSA
124241917 5268 Malvidae View MSA
124064877 5270 Rosid View MSA
123753422 5271 Pentapetalae View MSA
122787194 5272 Eudicot View MSA
122050416 5273 Angiosperm View MSA
121350019 5274 Embryophyte View MSA
123426685 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain