Gene : Cagra.1383s0011 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31867:SF7 - EXPANSIN-A20 Genomic Order:  11
Name:  ? Cagra.1383s0011 Secondary Identifier:  ? PAC:28901814
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1383s0011 0.5kb upstream 0.5kb upstream 1357 true Scaffold1383: 36578-37934 Capsella grandiflora
Cagra.1383s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold1383: 37435-37934 Capsella grandiflora
Cagra.1383s0011 0.5kb downstream 0.5kb downstream 1357 true Scaffold1383: 36078-37434 Capsella grandiflora
Cagra.1383s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold1383: 36078-36577 Capsella grandiflora
Cagra.1383s0011 1.0kb upstream 1.0kb upstream 1857 true Scaffold1383: 36578-38434 Capsella grandiflora
Cagra.1383s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold1383: 37435-38434 Capsella grandiflora
Cagra.1383s0011 1.0kb downstream 1.0kb downstream 1857 true Scaffold1383: 35578-37434 Capsella grandiflora
Cagra.1383s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold1383: 35578-36577 Capsella grandiflora
Cagra.1383s0011 2.0kb upstream 2.0kb upstream 2857 true Scaffold1383: 36578-39434 Capsella grandiflora
Cagra.1383s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold1383: 37435-39434 Capsella grandiflora
Cagra.1383s0011 2.0kb downstream 2.0kb downstream 2857 true Scaffold1383: 34578-37434 Capsella grandiflora
Cagra.1383s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold1383: 34578-36577 Capsella grandiflora
Cagra.1383s0011 5.0kb upstream 5.0kb upstream 5857 true Scaffold1383: 36578-42434 Capsella grandiflora
Cagra.1383s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold1383: 37435-42434 Capsella grandiflora
Cagra.1383s0011 5.0kb downstream 5.0kb downstream 5857 true Scaffold1383: 31578-37434 Capsella grandiflora
Cagra.1383s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold1383: 31578-36577 Capsella grandiflora
Cagra.1383s0011 10.0kb upstream 10.0kb upstream 10857 true Scaffold1383: 36578-47434 Capsella grandiflora
Cagra.1383s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold1383: 37435-47434 Capsella grandiflora
Cagra.1383s0011 10.0kb downstream 10.0kb downstream 10857 true Scaffold1383: 26578-37434 Capsella grandiflora
Cagra.1383s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold1383: 26578-36577 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365737 5261 Brassicaceae View MSA
123829739 5264 Brassicales-Malvales View MSA
124341047 5266 SBM View MSA
124238174 5268 Malvidae View MSA
124065667 5270 Rosid View MSA
123746743 5271 Pentapetalae View MSA
122791118 5272 Eudicot View MSA
122045799 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121310504 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain