Gene : Cagra.1383s0030 C. grandiflora v1.1
Defline:  (1 of 1) PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 Genomic Order:  30
Name:  ? Cagra.1383s0030 Secondary Identifier:  ? PAC:28901758
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1383s0030 0.5kb upstream 0.5kb upstream 3075 true Scaffold1383: 96563-99637 Capsella grandiflora
Cagra.1383s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold1383: 96563-97062 Capsella grandiflora
Cagra.1383s0030 0.5kb downstream 0.5kb downstream 3075 true Scaffold1383: 97063-100137 Capsella grandiflora
Cagra.1383s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold1383: 99638-100137 Capsella grandiflora
Cagra.1383s0030 1.0kb upstream 1.0kb upstream 3575 true Scaffold1383: 96063-99637 Capsella grandiflora
Cagra.1383s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold1383: 96063-97062 Capsella grandiflora
Cagra.1383s0030 1.0kb downstream 1.0kb downstream 3575 true Scaffold1383: 97063-100637 Capsella grandiflora
Cagra.1383s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold1383: 99638-100637 Capsella grandiflora
Cagra.1383s0030 2.0kb upstream 2.0kb upstream 4575 true Scaffold1383: 95063-99637 Capsella grandiflora
Cagra.1383s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold1383: 95063-97062 Capsella grandiflora
Cagra.1383s0030 2.0kb downstream 2.0kb downstream 4575 true Scaffold1383: 97063-101637 Capsella grandiflora
Cagra.1383s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold1383: 99638-101637 Capsella grandiflora
Cagra.1383s0030 5.0kb upstream 5.0kb upstream 7575 true Scaffold1383: 92063-99637 Capsella grandiflora
Cagra.1383s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold1383: 92063-97062 Capsella grandiflora
Cagra.1383s0030 5.0kb downstream 5.0kb downstream 7575 true Scaffold1383: 97063-104637 Capsella grandiflora
Cagra.1383s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold1383: 99638-104637 Capsella grandiflora
Cagra.1383s0030 10.0kb upstream 10.0kb upstream 12575 true Scaffold1383: 87063-99637 Capsella grandiflora
Cagra.1383s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold1383: 87063-97062 Capsella grandiflora
Cagra.1383s0030 10.0kb downstream 10.0kb downstream 12575 true Scaffold1383: 97063-109637 Capsella grandiflora
Cagra.1383s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold1383: 99638-109637 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375364 5261 Brassicaceae View MSA
123834927 5264 Brassicales-Malvales View MSA
124336855 5266 SBM View MSA
124242836 5268 Malvidae View MSA
124066170 5270 Rosid View MSA
123737704 5271 Pentapetalae View MSA
122792292 5272 Eudicot View MSA
122042177 5273 Angiosperm View MSA
121349126 5274 Embryophyte View MSA
123381182 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain