Gene : Cagra.1365s0063 C. grandiflora v1.1
Defline:  (1 of 168) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  63
Name:  ? Cagra.1365s0063 Secondary Identifier:  ? PAC:28919213
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1365s0063 0.5kb upstream 0.5kb upstream 2227 true Scaffold1365: 209827-212053 Capsella grandiflora
Cagra.1365s0063 0.5kb upstream 0.5kb upstream 500 false Scaffold1365: 209827-210326 Capsella grandiflora
Cagra.1365s0063 0.5kb downstream 0.5kb downstream 2227 true Scaffold1365: 210327-212553 Capsella grandiflora
Cagra.1365s0063 0.5kb downstream 0.5kb downstream 500 false Scaffold1365: 212054-212553 Capsella grandiflora
Cagra.1365s0063 1.0kb upstream 1.0kb upstream 2727 true Scaffold1365: 209327-212053 Capsella grandiflora
Cagra.1365s0063 1.0kb upstream 1.0kb upstream 1000 false Scaffold1365: 209327-210326 Capsella grandiflora
Cagra.1365s0063 1.0kb downstream 1.0kb downstream 2727 true Scaffold1365: 210327-213053 Capsella grandiflora
Cagra.1365s0063 1.0kb downstream 1.0kb downstream 1000 false Scaffold1365: 212054-213053 Capsella grandiflora
Cagra.1365s0063 2.0kb upstream 2.0kb upstream 3727 true Scaffold1365: 208327-212053 Capsella grandiflora
Cagra.1365s0063 2.0kb upstream 2.0kb upstream 2000 false Scaffold1365: 208327-210326 Capsella grandiflora
Cagra.1365s0063 2.0kb downstream 2.0kb downstream 3727 true Scaffold1365: 210327-214053 Capsella grandiflora
Cagra.1365s0063 2.0kb downstream 2.0kb downstream 2000 false Scaffold1365: 212054-214053 Capsella grandiflora
Cagra.1365s0063 5.0kb upstream 5.0kb upstream 6727 true Scaffold1365: 205327-212053 Capsella grandiflora
Cagra.1365s0063 5.0kb upstream 5.0kb upstream 5000 false Scaffold1365: 205327-210326 Capsella grandiflora
Cagra.1365s0063 5.0kb downstream 5.0kb downstream 6727 true Scaffold1365: 210327-217053 Capsella grandiflora
Cagra.1365s0063 5.0kb downstream 5.0kb downstream 5000 false Scaffold1365: 212054-217053 Capsella grandiflora
Cagra.1365s0063 10.0kb upstream 10.0kb upstream 11727 true Scaffold1365: 200327-212053 Capsella grandiflora
Cagra.1365s0063 10.0kb upstream 10.0kb upstream 10000 false Scaffold1365: 200327-210326 Capsella grandiflora
Cagra.1365s0063 10.0kb downstream 10.0kb downstream 11727 true Scaffold1365: 210327-222053 Capsella grandiflora
Cagra.1365s0063 10.0kb downstream 10.0kb downstream 10000 false Scaffold1365: 212054-222053 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364903 5261 Brassicaceae View MSA
123832133 5264 Brassicales-Malvales View MSA
124321776 5266 SBM View MSA
124243300 5268 Malvidae View MSA
124072342 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain