Gene : Cagra.1365s0089 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10632 - SULFIDE:QUINONE OXIDOREDUCTASE Genomic Order:  89
Name:  ? Cagra.1365s0089 Secondary Identifier:  ? PAC:28919225
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7279 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1365s0089 0.5kb upstream 0.5kb upstream 3470 true Scaffold1365: 308029-311498 Capsella grandiflora
Cagra.1365s0089 0.5kb upstream 0.5kb upstream 500 false Scaffold1365: 310999-311498 Capsella grandiflora
Cagra.1365s0089 0.5kb downstream 0.5kb downstream 3470 true Scaffold1365: 307529-310998 Capsella grandiflora
Cagra.1365s0089 0.5kb downstream 0.5kb downstream 500 false Scaffold1365: 307529-308028 Capsella grandiflora
Cagra.1365s0089 1.0kb upstream 1.0kb upstream 3970 true Scaffold1365: 308029-311998 Capsella grandiflora
Cagra.1365s0089 1.0kb upstream 1.0kb upstream 1000 false Scaffold1365: 310999-311998 Capsella grandiflora
Cagra.1365s0089 1.0kb downstream 1.0kb downstream 3970 true Scaffold1365: 307029-310998 Capsella grandiflora
Cagra.1365s0089 1.0kb downstream 1.0kb downstream 1000 false Scaffold1365: 307029-308028 Capsella grandiflora
Cagra.1365s0089 2.0kb upstream 2.0kb upstream 4970 true Scaffold1365: 308029-312998 Capsella grandiflora
Cagra.1365s0089 2.0kb upstream 2.0kb upstream 2000 false Scaffold1365: 310999-312998 Capsella grandiflora
Cagra.1365s0089 2.0kb downstream 2.0kb downstream 4970 true Scaffold1365: 306029-310998 Capsella grandiflora
Cagra.1365s0089 2.0kb downstream 2.0kb downstream 2000 false Scaffold1365: 306029-308028 Capsella grandiflora
Cagra.1365s0089 5.0kb upstream 5.0kb upstream 7970 true Scaffold1365: 308029-315998 Capsella grandiflora
Cagra.1365s0089 5.0kb upstream 5.0kb upstream 5000 false Scaffold1365: 310999-315998 Capsella grandiflora
Cagra.1365s0089 5.0kb downstream 5.0kb downstream 7970 true Scaffold1365: 303029-310998 Capsella grandiflora
Cagra.1365s0089 5.0kb downstream 5.0kb downstream 5000 false Scaffold1365: 303029-308028 Capsella grandiflora
Cagra.1365s0089 10.0kb upstream 10.0kb upstream 12970 true Scaffold1365: 308029-320998 Capsella grandiflora
Cagra.1365s0089 10.0kb upstream 10.0kb upstream 10000 false Scaffold1365: 310999-320998 Capsella grandiflora
Cagra.1365s0089 10.0kb downstream 10.0kb downstream 12970 true Scaffold1365: 298029-310998 Capsella grandiflora
Cagra.1365s0089 10.0kb downstream 10.0kb downstream 10000 false Scaffold1365: 298029-308028 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376650 5261 Brassicaceae View MSA
123833166 5264 Brassicales-Malvales View MSA
124337144 5266 SBM View MSA
124242245 5268 Malvidae View MSA
124064552 5270 Rosid View MSA
123736463 5271 Pentapetalae View MSA
122787892 5272 Eudicot View MSA
122042491 5273 Angiosperm View MSA
121344748 5274 Embryophyte View MSA
123426339 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain