Gene : Cagra.1365s0107 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10048:SF22 - PHOSPHATIDYLINOSITOL 4-KINASE BETA Genomic Order:  107
Name:  ? Cagra.1365s0107 Secondary Identifier:  ? PAC:28919183
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6351 Capsella grandiflora pathologic  
Cgrandiflora PWY-6352 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1365s0107 0.5kb upstream 0.5kb upstream 7577 true Scaffold1365: 352953-360529 Capsella grandiflora
Cagra.1365s0107 0.5kb upstream 0.5kb upstream 500 false Scaffold1365: 360030-360529 Capsella grandiflora
Cagra.1365s0107 0.5kb downstream 0.5kb downstream 7577 true Scaffold1365: 352453-360029 Capsella grandiflora
Cagra.1365s0107 0.5kb downstream 0.5kb downstream 500 false Scaffold1365: 352453-352952 Capsella grandiflora
Cagra.1365s0107 1.0kb upstream 1.0kb upstream 8077 true Scaffold1365: 352953-361029 Capsella grandiflora
Cagra.1365s0107 1.0kb upstream 1.0kb upstream 1000 false Scaffold1365: 360030-361029 Capsella grandiflora
Cagra.1365s0107 1.0kb downstream 1.0kb downstream 8077 true Scaffold1365: 351953-360029 Capsella grandiflora
Cagra.1365s0107 1.0kb downstream 1.0kb downstream 1000 false Scaffold1365: 351953-352952 Capsella grandiflora
Cagra.1365s0107 2.0kb upstream 2.0kb upstream 9077 true Scaffold1365: 352953-362029 Capsella grandiflora
Cagra.1365s0107 2.0kb upstream 2.0kb upstream 2000 false Scaffold1365: 360030-362029 Capsella grandiflora
Cagra.1365s0107 2.0kb downstream 2.0kb downstream 9077 true Scaffold1365: 350953-360029 Capsella grandiflora
Cagra.1365s0107 2.0kb downstream 2.0kb downstream 2000 false Scaffold1365: 350953-352952 Capsella grandiflora
Cagra.1365s0107 5.0kb upstream 5.0kb upstream 12077 true Scaffold1365: 352953-365029 Capsella grandiflora
Cagra.1365s0107 5.0kb upstream 5.0kb upstream 5000 false Scaffold1365: 360030-365029 Capsella grandiflora
Cagra.1365s0107 5.0kb downstream 5.0kb downstream 12077 true Scaffold1365: 347953-360029 Capsella grandiflora
Cagra.1365s0107 5.0kb downstream 5.0kb downstream 5000 false Scaffold1365: 347953-352952 Capsella grandiflora
Cagra.1365s0107 10.0kb upstream 10.0kb upstream 17077 true Scaffold1365: 352953-370029 Capsella grandiflora
Cagra.1365s0107 10.0kb upstream 10.0kb upstream 10000 false Scaffold1365: 360030-370029 Capsella grandiflora
Cagra.1365s0107 10.0kb downstream 10.0kb downstream 17077 true Scaffold1365: 342953-360029 Capsella grandiflora
Cagra.1365s0107 10.0kb downstream 10.0kb downstream 10000 false Scaffold1365: 342953-352952 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343193 5261 Brassicaceae View MSA
123836100 5264 Brassicales-Malvales View MSA
124343790 5266 SBM View MSA
124239009 5268 Malvidae View MSA
124066780 5270 Rosid View MSA
123749784 5271 Pentapetalae View MSA
122786671 5272 Eudicot View MSA
122047104 5273 Angiosperm View MSA
121345174 5274 Embryophyte View MSA
123380170 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain