Gene : Cagra.1372s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12526:SF412 - GLYCOSYL TRANSFERASE FAMILY 1 PROTEIN Genomic Order:  4
Name:  ? Cagra.1372s0004 Secondary Identifier:  ? PAC:28907336
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1372s0004 0.5kb upstream 0.5kb upstream 5954 true Scaffold1372: 5713-11666 Capsella grandiflora
Cagra.1372s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1372: 5713-6212 Capsella grandiflora
Cagra.1372s0004 0.5kb downstream 0.5kb downstream 5954 true Scaffold1372: 6213-12166 Capsella grandiflora
Cagra.1372s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1372: 11667-12166 Capsella grandiflora
Cagra.1372s0004 1.0kb upstream 1.0kb upstream 6454 true Scaffold1372: 5213-11666 Capsella grandiflora
Cagra.1372s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1372: 5213-6212 Capsella grandiflora
Cagra.1372s0004 1.0kb downstream 1.0kb downstream 6454 true Scaffold1372: 6213-12666 Capsella grandiflora
Cagra.1372s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1372: 11667-12666 Capsella grandiflora
Cagra.1372s0004 2.0kb upstream 2.0kb upstream 7454 true Scaffold1372: 4213-11666 Capsella grandiflora
Cagra.1372s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1372: 4213-6212 Capsella grandiflora
Cagra.1372s0004 2.0kb downstream 2.0kb downstream 7454 true Scaffold1372: 6213-13666 Capsella grandiflora
Cagra.1372s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1372: 11667-13666 Capsella grandiflora
Cagra.1372s0004 5.0kb upstream 5.0kb upstream 10454 true Scaffold1372: 1213-11666 Capsella grandiflora
Cagra.1372s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1372: 1213-6212 Capsella grandiflora
Cagra.1372s0004 5.0kb downstream 5.0kb downstream 10454 true Scaffold1372: 6213-16666 Capsella grandiflora
Cagra.1372s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1372: 11667-16666 Capsella grandiflora
Cagra.1372s0004 10.0kb upstream 10.0kb upstream 11666 true Scaffold1372: 1-11666 Capsella grandiflora
Cagra.1372s0004 10.0kb upstream 10.0kb upstream 6212 false Scaffold1372: 1-6212 Capsella grandiflora
Cagra.1372s0004 10.0kb downstream 10.0kb downstream 15454 true Scaffold1372: 6213-21666 Capsella grandiflora
Cagra.1372s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1372: 11667-21666 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371068 5261 Brassicaceae View MSA
123836161 5264 Brassicales-Malvales View MSA
124344627 5266 SBM View MSA
124251599 5268 Malvidae View MSA
124061687 5270 Rosid View MSA
123745087 5271 Pentapetalae View MSA
122793237 5272 Eudicot View MSA
122043376 5273 Angiosperm View MSA
121346761 5274 Embryophyte View MSA
123380440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain