Gene : Cagra.1361s0045 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31642:SF6 - HXXXD-TYPE ACYL-TRANSFERASE-RELATED Genomic Order:  45
Name:  ? Cagra.1361s0045 Secondary Identifier:  ? PAC:28915533
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-4203 Capsella grandiflora pathologic  
Cgrandiflora PWY-5835 Capsella grandiflora pathologic  
Cgrandiflora PWY-6801 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1361s0045 0.5kb upstream 0.5kb upstream 1963 true Scaffold1361: 157804-159766 Capsella grandiflora
Cagra.1361s0045 0.5kb upstream 0.5kb upstream 500 false Scaffold1361: 159267-159766 Capsella grandiflora
Cagra.1361s0045 0.5kb downstream 0.5kb downstream 1963 true Scaffold1361: 157304-159266 Capsella grandiflora
Cagra.1361s0045 0.5kb downstream 0.5kb downstream 500 false Scaffold1361: 157304-157803 Capsella grandiflora
Cagra.1361s0045 1.0kb upstream 1.0kb upstream 2463 true Scaffold1361: 157804-160266 Capsella grandiflora
Cagra.1361s0045 1.0kb upstream 1.0kb upstream 1000 false Scaffold1361: 159267-160266 Capsella grandiflora
Cagra.1361s0045 1.0kb downstream 1.0kb downstream 2463 true Scaffold1361: 156804-159266 Capsella grandiflora
Cagra.1361s0045 1.0kb downstream 1.0kb downstream 1000 false Scaffold1361: 156804-157803 Capsella grandiflora
Cagra.1361s0045 2.0kb upstream 2.0kb upstream 3463 true Scaffold1361: 157804-161266 Capsella grandiflora
Cagra.1361s0045 2.0kb upstream 2.0kb upstream 2000 false Scaffold1361: 159267-161266 Capsella grandiflora
Cagra.1361s0045 2.0kb downstream 2.0kb downstream 3463 true Scaffold1361: 155804-159266 Capsella grandiflora
Cagra.1361s0045 2.0kb downstream 2.0kb downstream 2000 false Scaffold1361: 155804-157803 Capsella grandiflora
Cagra.1361s0045 5.0kb upstream 5.0kb upstream 6463 true Scaffold1361: 157804-164266 Capsella grandiflora
Cagra.1361s0045 5.0kb upstream 5.0kb upstream 5000 false Scaffold1361: 159267-164266 Capsella grandiflora
Cagra.1361s0045 5.0kb downstream 5.0kb downstream 6463 true Scaffold1361: 152804-159266 Capsella grandiflora
Cagra.1361s0045 5.0kb downstream 5.0kb downstream 5000 false Scaffold1361: 152804-157803 Capsella grandiflora
Cagra.1361s0045 10.0kb upstream 10.0kb upstream 11463 true Scaffold1361: 157804-169266 Capsella grandiflora
Cagra.1361s0045 10.0kb upstream 10.0kb upstream 10000 false Scaffold1361: 159267-169266 Capsella grandiflora
Cagra.1361s0045 10.0kb downstream 10.0kb downstream 11463 true Scaffold1361: 147804-159266 Capsella grandiflora
Cagra.1361s0045 10.0kb downstream 10.0kb downstream 10000 false Scaffold1361: 147804-157803 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366246 5261 Brassicaceae View MSA
123831825 5264 Brassicales-Malvales View MSA
124349768 5266 SBM View MSA
124247936 5268 Malvidae View MSA
124064469 5270 Rosid View MSA
123743346 5271 Pentapetalae View MSA
122797720 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain