Gene : Cagra.1361s0068 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11599:SF16 - PROTEASOME SUBUNIT ALPHA TYPE-2 Genomic Order:  68
Name:  ? Cagra.1361s0068 Secondary Identifier:  ? PAC:28915583
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1361s0068 0.5kb upstream 0.5kb upstream 3126 true Scaffold1361: 244816-247941 Capsella grandiflora
Cagra.1361s0068 0.5kb upstream 0.5kb upstream 500 false Scaffold1361: 247442-247941 Capsella grandiflora
Cagra.1361s0068 0.5kb downstream 0.5kb downstream 3126 true Scaffold1361: 244316-247441 Capsella grandiflora
Cagra.1361s0068 0.5kb downstream 0.5kb downstream 500 false Scaffold1361: 244316-244815 Capsella grandiflora
Cagra.1361s0068 1.0kb upstream 1.0kb upstream 3626 true Scaffold1361: 244816-248441 Capsella grandiflora
Cagra.1361s0068 1.0kb upstream 1.0kb upstream 1000 false Scaffold1361: 247442-248441 Capsella grandiflora
Cagra.1361s0068 1.0kb downstream 1.0kb downstream 3626 true Scaffold1361: 243816-247441 Capsella grandiflora
Cagra.1361s0068 1.0kb downstream 1.0kb downstream 1000 false Scaffold1361: 243816-244815 Capsella grandiflora
Cagra.1361s0068 2.0kb upstream 2.0kb upstream 4626 true Scaffold1361: 244816-249441 Capsella grandiflora
Cagra.1361s0068 2.0kb upstream 2.0kb upstream 2000 false Scaffold1361: 247442-249441 Capsella grandiflora
Cagra.1361s0068 2.0kb downstream 2.0kb downstream 4626 true Scaffold1361: 242816-247441 Capsella grandiflora
Cagra.1361s0068 2.0kb downstream 2.0kb downstream 2000 false Scaffold1361: 242816-244815 Capsella grandiflora
Cagra.1361s0068 5.0kb upstream 5.0kb upstream 7626 true Scaffold1361: 244816-252441 Capsella grandiflora
Cagra.1361s0068 5.0kb upstream 5.0kb upstream 5000 false Scaffold1361: 247442-252441 Capsella grandiflora
Cagra.1361s0068 5.0kb downstream 5.0kb downstream 7626 true Scaffold1361: 239816-247441 Capsella grandiflora
Cagra.1361s0068 5.0kb downstream 5.0kb downstream 5000 false Scaffold1361: 239816-244815 Capsella grandiflora
Cagra.1361s0068 10.0kb upstream 10.0kb upstream 12626 true Scaffold1361: 244816-257441 Capsella grandiflora
Cagra.1361s0068 10.0kb upstream 10.0kb upstream 10000 false Scaffold1361: 247442-257441 Capsella grandiflora
Cagra.1361s0068 10.0kb downstream 10.0kb downstream 12626 true Scaffold1361: 234816-247441 Capsella grandiflora
Cagra.1361s0068 10.0kb downstream 10.0kb downstream 10000 false Scaffold1361: 234816-244815 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026291 5273 Angiosperm View MSA
122376860 5261 Brassicaceae View MSA
123841015 5264 Brassicales-Malvales View MSA
124350463 5266 SBM View MSA
124241127 5268 Malvidae View MSA
124069190 5270 Rosid View MSA
123746972 5271 Pentapetalae View MSA
122795211 5272 Eudicot View MSA
121350421 5274 Embryophyte View MSA
123426464 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain