Gene : Cagra.1365s0019 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12565:SF153 - TRANSCRIPTION FACTOR BIM1 Genomic Order:  19
Name:  ? Cagra.1365s0019 Secondary Identifier:  ? PAC:28919192
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1365s0019 0.5kb upstream 0.5kb upstream 4548 true Scaffold1365: 51035-55582 Capsella grandiflora
Cagra.1365s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold1365: 55083-55582 Capsella grandiflora
Cagra.1365s0019 0.5kb downstream 0.5kb downstream 4548 true Scaffold1365: 50535-55082 Capsella grandiflora
Cagra.1365s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold1365: 50535-51034 Capsella grandiflora
Cagra.1365s0019 1.0kb upstream 1.0kb upstream 5048 true Scaffold1365: 51035-56082 Capsella grandiflora
Cagra.1365s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold1365: 55083-56082 Capsella grandiflora
Cagra.1365s0019 1.0kb downstream 1.0kb downstream 5048 true Scaffold1365: 50035-55082 Capsella grandiflora
Cagra.1365s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold1365: 50035-51034 Capsella grandiflora
Cagra.1365s0019 2.0kb upstream 2.0kb upstream 6048 true Scaffold1365: 51035-57082 Capsella grandiflora
Cagra.1365s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold1365: 55083-57082 Capsella grandiflora
Cagra.1365s0019 2.0kb downstream 2.0kb downstream 6048 true Scaffold1365: 49035-55082 Capsella grandiflora
Cagra.1365s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold1365: 49035-51034 Capsella grandiflora
Cagra.1365s0019 5.0kb upstream 5.0kb upstream 9048 true Scaffold1365: 51035-60082 Capsella grandiflora
Cagra.1365s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold1365: 55083-60082 Capsella grandiflora
Cagra.1365s0019 5.0kb downstream 5.0kb downstream 9048 true Scaffold1365: 46035-55082 Capsella grandiflora
Cagra.1365s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold1365: 46035-51034 Capsella grandiflora
Cagra.1365s0019 10.0kb upstream 10.0kb upstream 14048 true Scaffold1365: 51035-65082 Capsella grandiflora
Cagra.1365s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold1365: 55083-65082 Capsella grandiflora
Cagra.1365s0019 10.0kb downstream 10.0kb downstream 14048 true Scaffold1365: 41035-55082 Capsella grandiflora
Cagra.1365s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold1365: 41035-51034 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361740 5261 Brassicaceae View MSA
123833621 5264 Brassicales-Malvales View MSA
124321882 5266 SBM View MSA
124250491 5268 Malvidae View MSA
124066777 5270 Rosid View MSA
123738645 5271 Pentapetalae View MSA
122790983 5272 Eudicot View MSA
122046881 5273 Angiosperm View MSA
121348142 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain