Gene : Cagra.1365s0046 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11452:SF18 - ALPHA-GALACTOSIDASE 1 Genomic Order:  46
Name:  ? Cagra.1365s0046 Secondary Identifier:  ? PAC:28919198
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY0-1301 Capsella grandiflora pathologic  
Cgrandiflora PWY-6527 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1365s0046 0.5kb upstream 0.5kb upstream 3435 true Scaffold1365: 147186-150620 Capsella grandiflora
Cagra.1365s0046 0.5kb upstream 0.5kb upstream 500 false Scaffold1365: 150121-150620 Capsella grandiflora
Cagra.1365s0046 0.5kb downstream 0.5kb downstream 3435 true Scaffold1365: 146686-150120 Capsella grandiflora
Cagra.1365s0046 0.5kb downstream 0.5kb downstream 500 false Scaffold1365: 146686-147185 Capsella grandiflora
Cagra.1365s0046 1.0kb upstream 1.0kb upstream 3935 true Scaffold1365: 147186-151120 Capsella grandiflora
Cagra.1365s0046 1.0kb upstream 1.0kb upstream 1000 false Scaffold1365: 150121-151120 Capsella grandiflora
Cagra.1365s0046 1.0kb downstream 1.0kb downstream 3935 true Scaffold1365: 146186-150120 Capsella grandiflora
Cagra.1365s0046 1.0kb downstream 1.0kb downstream 1000 false Scaffold1365: 146186-147185 Capsella grandiflora
Cagra.1365s0046 2.0kb upstream 2.0kb upstream 4935 true Scaffold1365: 147186-152120 Capsella grandiflora
Cagra.1365s0046 2.0kb upstream 2.0kb upstream 2000 false Scaffold1365: 150121-152120 Capsella grandiflora
Cagra.1365s0046 2.0kb downstream 2.0kb downstream 4935 true Scaffold1365: 145186-150120 Capsella grandiflora
Cagra.1365s0046 2.0kb downstream 2.0kb downstream 2000 false Scaffold1365: 145186-147185 Capsella grandiflora
Cagra.1365s0046 5.0kb upstream 5.0kb upstream 7935 true Scaffold1365: 147186-155120 Capsella grandiflora
Cagra.1365s0046 5.0kb upstream 5.0kb upstream 5000 false Scaffold1365: 150121-155120 Capsella grandiflora
Cagra.1365s0046 5.0kb downstream 5.0kb downstream 7935 true Scaffold1365: 142186-150120 Capsella grandiflora
Cagra.1365s0046 5.0kb downstream 5.0kb downstream 5000 false Scaffold1365: 142186-147185 Capsella grandiflora
Cagra.1365s0046 10.0kb upstream 10.0kb upstream 12935 true Scaffold1365: 147186-160120 Capsella grandiflora
Cagra.1365s0046 10.0kb upstream 10.0kb upstream 10000 false Scaffold1365: 150121-160120 Capsella grandiflora
Cagra.1365s0046 10.0kb downstream 10.0kb downstream 12935 true Scaffold1365: 137186-150120 Capsella grandiflora
Cagra.1365s0046 10.0kb downstream 10.0kb downstream 10000 false Scaffold1365: 137186-147185 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377510 5261 Brassicaceae View MSA
123835368 5264 Brassicales-Malvales View MSA
124322036 5266 SBM View MSA
124237729 5268 Malvidae View MSA
124069485 5270 Rosid View MSA
123749303 5271 Pentapetalae View MSA
122796981 5272 Eudicot View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain