Gene : Cagra.1642s0057 C. grandiflora v1.1
Defline:  (1 of 3) PTHR24006:SF526 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 10-RELATED Genomic Order:  57
Name:  ? Cagra.1642s0057 Secondary Identifier:  ? PAC:28898797
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1642s0057 0.5kb upstream 0.5kb upstream 6830 true Scaffold1642: 201428-208257 Capsella grandiflora
Cagra.1642s0057 0.5kb upstream 0.5kb upstream 500 false Scaffold1642: 207758-208257 Capsella grandiflora
Cagra.1642s0057 0.5kb downstream 0.5kb downstream 6830 true Scaffold1642: 200928-207757 Capsella grandiflora
Cagra.1642s0057 0.5kb downstream 0.5kb downstream 500 false Scaffold1642: 200928-201427 Capsella grandiflora
Cagra.1642s0057 1.0kb upstream 1.0kb upstream 7330 true Scaffold1642: 201428-208757 Capsella grandiflora
Cagra.1642s0057 1.0kb upstream 1.0kb upstream 1000 false Scaffold1642: 207758-208757 Capsella grandiflora
Cagra.1642s0057 1.0kb downstream 1.0kb downstream 7330 true Scaffold1642: 200428-207757 Capsella grandiflora
Cagra.1642s0057 1.0kb downstream 1.0kb downstream 1000 false Scaffold1642: 200428-201427 Capsella grandiflora
Cagra.1642s0057 2.0kb upstream 2.0kb upstream 8330 true Scaffold1642: 201428-209757 Capsella grandiflora
Cagra.1642s0057 2.0kb upstream 2.0kb upstream 2000 false Scaffold1642: 207758-209757 Capsella grandiflora
Cagra.1642s0057 2.0kb downstream 2.0kb downstream 8330 true Scaffold1642: 199428-207757 Capsella grandiflora
Cagra.1642s0057 2.0kb downstream 2.0kb downstream 2000 false Scaffold1642: 199428-201427 Capsella grandiflora
Cagra.1642s0057 5.0kb upstream 5.0kb upstream 11330 true Scaffold1642: 201428-212757 Capsella grandiflora
Cagra.1642s0057 5.0kb upstream 5.0kb upstream 5000 false Scaffold1642: 207758-212757 Capsella grandiflora
Cagra.1642s0057 5.0kb downstream 5.0kb downstream 11330 true Scaffold1642: 196428-207757 Capsella grandiflora
Cagra.1642s0057 5.0kb downstream 5.0kb downstream 5000 false Scaffold1642: 196428-201427 Capsella grandiflora
Cagra.1642s0057 10.0kb upstream 10.0kb upstream 16330 true Scaffold1642: 201428-217757 Capsella grandiflora
Cagra.1642s0057 10.0kb upstream 10.0kb upstream 10000 false Scaffold1642: 207758-217757 Capsella grandiflora
Cagra.1642s0057 10.0kb downstream 10.0kb downstream 16330 true Scaffold1642: 191428-207757 Capsella grandiflora
Cagra.1642s0057 10.0kb downstream 10.0kb downstream 10000 false Scaffold1642: 191428-201427 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362193 5261 Brassicaceae View MSA
123829149 5264 Brassicales-Malvales View MSA
124344862 5266 SBM View MSA
124245021 5268 Malvidae View MSA
124064988 5270 Rosid View MSA
123740108 5271 Pentapetalae View MSA
122790123 5272 Eudicot View MSA
122043938 5273 Angiosperm View MSA
121310212 5274 Embryophyte View MSA
123426305 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain