Gene : Cagra.1642s0086 C. grandiflora v1.1
Defline:  (1 of 2) 1.4.7.1 - Glutamate synthase (ferredoxin) / Ferredoxin-dependent glutamate synthase Genomic Order:  86
Name:  ? Cagra.1642s0086 Secondary Identifier:  ? PAC:28898903
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora CITRULBIO-PWY Capsella grandiflora pathologic  
Cgrandiflora GLUTAMINDEG-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-3282 Capsella grandiflora pathologic  
Cgrandiflora PWY-4341 Capsella grandiflora pathologic  
Cgrandiflora PWY-6549 Capsella grandiflora pathologic  
Cgrandiflora PWY-6964 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1642s0086 0.5kb upstream 0.5kb upstream 11707 true Scaffold1642: 301728-313434 Capsella grandiflora
Cagra.1642s0086 0.5kb upstream 0.5kb upstream 500 false Scaffold1642: 301728-302227 Capsella grandiflora
Cagra.1642s0086 0.5kb downstream 0.5kb downstream 11707 true Scaffold1642: 302228-313934 Capsella grandiflora
Cagra.1642s0086 0.5kb downstream 0.5kb downstream 500 false Scaffold1642: 313435-313934 Capsella grandiflora
Cagra.1642s0086 1.0kb upstream 1.0kb upstream 12207 true Scaffold1642: 301228-313434 Capsella grandiflora
Cagra.1642s0086 1.0kb upstream 1.0kb upstream 1000 false Scaffold1642: 301228-302227 Capsella grandiflora
Cagra.1642s0086 1.0kb downstream 1.0kb downstream 12207 true Scaffold1642: 302228-314434 Capsella grandiflora
Cagra.1642s0086 1.0kb downstream 1.0kb downstream 1000 false Scaffold1642: 313435-314434 Capsella grandiflora
Cagra.1642s0086 2.0kb upstream 2.0kb upstream 13207 true Scaffold1642: 300228-313434 Capsella grandiflora
Cagra.1642s0086 2.0kb upstream 2.0kb upstream 2000 false Scaffold1642: 300228-302227 Capsella grandiflora
Cagra.1642s0086 2.0kb downstream 2.0kb downstream 13207 true Scaffold1642: 302228-315434 Capsella grandiflora
Cagra.1642s0086 2.0kb downstream 2.0kb downstream 2000 false Scaffold1642: 313435-315434 Capsella grandiflora
Cagra.1642s0086 5.0kb upstream 5.0kb upstream 16207 true Scaffold1642: 297228-313434 Capsella grandiflora
Cagra.1642s0086 5.0kb upstream 5.0kb upstream 5000 false Scaffold1642: 297228-302227 Capsella grandiflora
Cagra.1642s0086 5.0kb downstream 5.0kb downstream 16207 true Scaffold1642: 302228-318434 Capsella grandiflora
Cagra.1642s0086 5.0kb downstream 5.0kb downstream 5000 false Scaffold1642: 313435-318434 Capsella grandiflora
Cagra.1642s0086 10.0kb upstream 10.0kb upstream 21207 true Scaffold1642: 292228-313434 Capsella grandiflora
Cagra.1642s0086 10.0kb upstream 10.0kb upstream 10000 false Scaffold1642: 292228-302227 Capsella grandiflora
Cagra.1642s0086 10.0kb downstream 10.0kb downstream 21207 true Scaffold1642: 302228-323434 Capsella grandiflora
Cagra.1642s0086 10.0kb downstream 10.0kb downstream 10000 false Scaffold1642: 313435-323434 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511077 5273 Angiosperm View MSA
122371936 5261 Brassicaceae View MSA
123800262 5264 Brassicales-Malvales View MSA
124297698 5266 SBM View MSA
124149522 5268 Malvidae View MSA
123875316 5270 Rosid View MSA
123459159 5271 Pentapetalae View MSA
122494554 5272 Eudicot View MSA
120784144 5274 Embryophyte View MSA
122826079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain