Gene : Cagra.1642s0104 C. grandiflora v1.1
Defline:  (1 of 2) PTHR33790:SF1 - PROTEIN EARLY RESPONSIVE TO DEHYDRATION 15 Genomic Order:  104
Name:  ? Cagra.1642s0104 Secondary Identifier:  ? PAC:28898841
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1642s0104 0.5kb upstream 0.5kb upstream 1977 true Scaffold1642: 394385-396361 Capsella grandiflora
Cagra.1642s0104 0.5kb upstream 0.5kb upstream 500 false Scaffold1642: 394385-394884 Capsella grandiflora
Cagra.1642s0104 0.5kb downstream 0.5kb downstream 1977 true Scaffold1642: 394885-396861 Capsella grandiflora
Cagra.1642s0104 0.5kb downstream 0.5kb downstream 500 false Scaffold1642: 396362-396861 Capsella grandiflora
Cagra.1642s0104 1.0kb upstream 1.0kb upstream 2477 true Scaffold1642: 393885-396361 Capsella grandiflora
Cagra.1642s0104 1.0kb upstream 1.0kb upstream 1000 false Scaffold1642: 393885-394884 Capsella grandiflora
Cagra.1642s0104 1.0kb downstream 1.0kb downstream 2477 true Scaffold1642: 394885-397361 Capsella grandiflora
Cagra.1642s0104 1.0kb downstream 1.0kb downstream 1000 false Scaffold1642: 396362-397361 Capsella grandiflora
Cagra.1642s0104 2.0kb upstream 2.0kb upstream 3477 true Scaffold1642: 392885-396361 Capsella grandiflora
Cagra.1642s0104 2.0kb upstream 2.0kb upstream 2000 false Scaffold1642: 392885-394884 Capsella grandiflora
Cagra.1642s0104 2.0kb downstream 2.0kb downstream 3477 true Scaffold1642: 394885-398361 Capsella grandiflora
Cagra.1642s0104 2.0kb downstream 2.0kb downstream 2000 false Scaffold1642: 396362-398361 Capsella grandiflora
Cagra.1642s0104 5.0kb upstream 5.0kb upstream 6477 true Scaffold1642: 389885-396361 Capsella grandiflora
Cagra.1642s0104 5.0kb upstream 5.0kb upstream 5000 false Scaffold1642: 389885-394884 Capsella grandiflora
Cagra.1642s0104 5.0kb downstream 5.0kb downstream 6477 true Scaffold1642: 394885-401361 Capsella grandiflora
Cagra.1642s0104 5.0kb downstream 5.0kb downstream 5000 false Scaffold1642: 396362-401361 Capsella grandiflora
Cagra.1642s0104 10.0kb upstream 10.0kb upstream 11477 true Scaffold1642: 384885-396361 Capsella grandiflora
Cagra.1642s0104 10.0kb upstream 10.0kb upstream 10000 false Scaffold1642: 384885-394884 Capsella grandiflora
Cagra.1642s0104 10.0kb downstream 10.0kb downstream 11477 true Scaffold1642: 394885-406361 Capsella grandiflora
Cagra.1642s0104 10.0kb downstream 10.0kb downstream 10000 false Scaffold1642: 396362-406361 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370488 5261 Brassicaceae View MSA
123830845 5264 Brassicales-Malvales View MSA
124339596 5266 SBM View MSA
124248566 5268 Malvidae View MSA
124070452 5270 Rosid View MSA
123742369 5271 Pentapetalae View MSA
122796171 5272 Eudicot View MSA
122048247 5273 Angiosperm View MSA
121345899 5274 Embryophyte View MSA
123380287 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain