Gene : Cagra.1642s0099 C. grandiflora v1.1
Defline:  (1 of 2) PF00651//PF11900 - BTB/POZ domain (BTB) // Domain of unknown function (DUF3420) (DUF3420) Genomic Order:  99
Name:  ? Cagra.1642s0099 Secondary Identifier:  ? PAC:28898796
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1642s0099 0.5kb upstream 0.5kb upstream 3089 true Scaffold1642: 368263-371351 Capsella grandiflora
Cagra.1642s0099 0.5kb upstream 0.5kb upstream 500 false Scaffold1642: 370852-371351 Capsella grandiflora
Cagra.1642s0099 0.5kb downstream 0.5kb downstream 3089 true Scaffold1642: 367763-370851 Capsella grandiflora
Cagra.1642s0099 0.5kb downstream 0.5kb downstream 500 false Scaffold1642: 367763-368262 Capsella grandiflora
Cagra.1642s0099 1.0kb upstream 1.0kb upstream 3589 true Scaffold1642: 368263-371851 Capsella grandiflora
Cagra.1642s0099 1.0kb upstream 1.0kb upstream 1000 false Scaffold1642: 370852-371851 Capsella grandiflora
Cagra.1642s0099 1.0kb downstream 1.0kb downstream 3589 true Scaffold1642: 367263-370851 Capsella grandiflora
Cagra.1642s0099 1.0kb downstream 1.0kb downstream 1000 false Scaffold1642: 367263-368262 Capsella grandiflora
Cagra.1642s0099 2.0kb upstream 2.0kb upstream 4589 true Scaffold1642: 368263-372851 Capsella grandiflora
Cagra.1642s0099 2.0kb upstream 2.0kb upstream 2000 false Scaffold1642: 370852-372851 Capsella grandiflora
Cagra.1642s0099 2.0kb downstream 2.0kb downstream 4589 true Scaffold1642: 366263-370851 Capsella grandiflora
Cagra.1642s0099 2.0kb downstream 2.0kb downstream 2000 false Scaffold1642: 366263-368262 Capsella grandiflora
Cagra.1642s0099 5.0kb upstream 5.0kb upstream 7589 true Scaffold1642: 368263-375851 Capsella grandiflora
Cagra.1642s0099 5.0kb upstream 5.0kb upstream 5000 false Scaffold1642: 370852-375851 Capsella grandiflora
Cagra.1642s0099 5.0kb downstream 5.0kb downstream 7589 true Scaffold1642: 363263-370851 Capsella grandiflora
Cagra.1642s0099 5.0kb downstream 5.0kb downstream 5000 false Scaffold1642: 363263-368262 Capsella grandiflora
Cagra.1642s0099 10.0kb upstream 10.0kb upstream 12589 true Scaffold1642: 368263-380851 Capsella grandiflora
Cagra.1642s0099 10.0kb upstream 10.0kb upstream 10000 false Scaffold1642: 370852-380851 Capsella grandiflora
Cagra.1642s0099 10.0kb downstream 10.0kb downstream 12589 true Scaffold1642: 358263-370851 Capsella grandiflora
Cagra.1642s0099 10.0kb downstream 10.0kb downstream 10000 false Scaffold1642: 358263-368262 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379111 5261 Brassicaceae View MSA
123835298 5264 Brassicales-Malvales View MSA
124341428 5266 SBM View MSA
124239709 5268 Malvidae View MSA
124068083 5270 Rosid View MSA
123743469 5271 Pentapetalae View MSA
122790802 5272 Eudicot View MSA
122046823 5273 Angiosperm View MSA
121349965 5274 Embryophyte View MSA
123381520 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain