Gene : Cagra.1645s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10809:SF48 - VESICLE-ASSOCIATED PROTEIN 4-1 Genomic Order:  1
Name:  ? Cagra.1645s0001 Secondary Identifier:  ? PAC:28902683
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1645s0001 0.5kb upstream 0.5kb upstream 1256 true Scaffold1645: 16-1271 Capsella grandiflora
Cagra.1645s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold1645: 772-1271 Capsella grandiflora
Cagra.1645s0001 0.5kb downstream 0.5kb downstream 771 true Scaffold1645: 1-771 Capsella grandiflora
Cagra.1645s0001 0.5kb downstream 0.5kb downstream 15 false Scaffold1645: 1-15 Capsella grandiflora
Cagra.1645s0001 1.0kb upstream 1.0kb upstream 1756 true Scaffold1645: 16-1771 Capsella grandiflora
Cagra.1645s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold1645: 772-1771 Capsella grandiflora
Cagra.1645s0001 1.0kb downstream 1.0kb downstream 771 true Scaffold1645: 1-771 Capsella grandiflora
Cagra.1645s0001 1.0kb downstream 1.0kb downstream 15 false Scaffold1645: 1-15 Capsella grandiflora
Cagra.1645s0001 2.0kb upstream 2.0kb upstream 2756 true Scaffold1645: 16-2771 Capsella grandiflora
Cagra.1645s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold1645: 772-2771 Capsella grandiflora
Cagra.1645s0001 2.0kb downstream 2.0kb downstream 771 true Scaffold1645: 1-771 Capsella grandiflora
Cagra.1645s0001 2.0kb downstream 2.0kb downstream 15 false Scaffold1645: 1-15 Capsella grandiflora
Cagra.1645s0001 5.0kb upstream 5.0kb upstream 5756 true Scaffold1645: 16-5771 Capsella grandiflora
Cagra.1645s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold1645: 772-5771 Capsella grandiflora
Cagra.1645s0001 5.0kb downstream 5.0kb downstream 771 true Scaffold1645: 1-771 Capsella grandiflora
Cagra.1645s0001 5.0kb downstream 5.0kb downstream 15 false Scaffold1645: 1-15 Capsella grandiflora
Cagra.1645s0001 10.0kb upstream 10.0kb upstream 10756 true Scaffold1645: 16-10771 Capsella grandiflora
Cagra.1645s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold1645: 772-10771 Capsella grandiflora
Cagra.1645s0001 10.0kb downstream 10.0kb downstream 771 true Scaffold1645: 1-771 Capsella grandiflora
Cagra.1645s0001 10.0kb downstream 10.0kb downstream 15 false Scaffold1645: 1-15 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121579367 5273 Angiosperm View MSA
122332777 5261 Brassicaceae Singleton cluster - no MSA
123773811 5264 Brassicales-Malvales Singleton cluster - no MSA
124272276 5266 SBM Singleton cluster - no MSA
124249933 5268 Malvidae View MSA
123952442 5270 Rosid View MSA
123530228 5271 Pentapetalae View MSA
122565197 5272 Eudicot View MSA
120851830 5274 Embryophyte View MSA
122892996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain