Gene : Cagra.1655s0002 C. grandiflora v1.1
Defline:  (1 of 68) PTHR32212:SF112 - FBD / LEUCINE RICH REPEAT DOMAINS CONTAINING PROTEIN-RELATED Genomic Order:  2
Name:  ? Cagra.1655s0002 Secondary Identifier:  ? PAC:28902889
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1655s0002 0.5kb upstream 0.5kb upstream 1882 true Scaffold1655: 8732-10613 Capsella grandiflora
Cagra.1655s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1655: 8732-9231 Capsella grandiflora
Cagra.1655s0002 0.5kb downstream 0.5kb downstream 1882 true Scaffold1655: 9232-11113 Capsella grandiflora
Cagra.1655s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1655: 10614-11113 Capsella grandiflora
Cagra.1655s0002 1.0kb upstream 1.0kb upstream 2382 true Scaffold1655: 8232-10613 Capsella grandiflora
Cagra.1655s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1655: 8232-9231 Capsella grandiflora
Cagra.1655s0002 1.0kb downstream 1.0kb downstream 2382 true Scaffold1655: 9232-11613 Capsella grandiflora
Cagra.1655s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1655: 10614-11613 Capsella grandiflora
Cagra.1655s0002 2.0kb upstream 2.0kb upstream 3382 true Scaffold1655: 7232-10613 Capsella grandiflora
Cagra.1655s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1655: 7232-9231 Capsella grandiflora
Cagra.1655s0002 2.0kb downstream 2.0kb downstream 3382 true Scaffold1655: 9232-12613 Capsella grandiflora
Cagra.1655s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1655: 10614-12613 Capsella grandiflora
Cagra.1655s0002 5.0kb upstream 5.0kb upstream 6382 true Scaffold1655: 4232-10613 Capsella grandiflora
Cagra.1655s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold1655: 4232-9231 Capsella grandiflora
Cagra.1655s0002 5.0kb downstream 5.0kb downstream 6382 true Scaffold1655: 9232-15613 Capsella grandiflora
Cagra.1655s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold1655: 10614-15613 Capsella grandiflora
Cagra.1655s0002 10.0kb upstream 10.0kb upstream 10613 true Scaffold1655: 1-10613 Capsella grandiflora
Cagra.1655s0002 10.0kb upstream 10.0kb upstream 9231 false Scaffold1655: 1-9231 Capsella grandiflora
Cagra.1655s0002 10.0kb downstream 10.0kb downstream 11382 true Scaffold1655: 9232-20613 Capsella grandiflora
Cagra.1655s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold1655: 10614-20613 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380537 5261 Brassicaceae View MSA
123802771 5264 Brassicales-Malvales View MSA
124299938 5266 SBM View MSA
124254039 5268 Malvidae View MSA
124073024 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain