Gene : Cagra.1655s0014 C. grandiflora v1.1
Defline:  (1 of 2) PTHR14009:SF9 - LETM1-LIKE PROTEIN Genomic Order:  14
Name:  ? Cagra.1655s0014 Secondary Identifier:  ? PAC:28902917
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1655s0014 0.5kb upstream 0.5kb upstream 6837 true Scaffold1655: 52989-59825 Capsella grandiflora
Cagra.1655s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold1655: 59326-59825 Capsella grandiflora
Cagra.1655s0014 0.5kb downstream 0.5kb downstream 6837 true Scaffold1655: 52489-59325 Capsella grandiflora
Cagra.1655s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold1655: 52489-52988 Capsella grandiflora
Cagra.1655s0014 1.0kb upstream 1.0kb upstream 7337 true Scaffold1655: 52989-60325 Capsella grandiflora
Cagra.1655s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold1655: 59326-60325 Capsella grandiflora
Cagra.1655s0014 1.0kb downstream 1.0kb downstream 7337 true Scaffold1655: 51989-59325 Capsella grandiflora
Cagra.1655s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold1655: 51989-52988 Capsella grandiflora
Cagra.1655s0014 2.0kb upstream 2.0kb upstream 8337 true Scaffold1655: 52989-61325 Capsella grandiflora
Cagra.1655s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold1655: 59326-61325 Capsella grandiflora
Cagra.1655s0014 2.0kb downstream 2.0kb downstream 8337 true Scaffold1655: 50989-59325 Capsella grandiflora
Cagra.1655s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold1655: 50989-52988 Capsella grandiflora
Cagra.1655s0014 5.0kb upstream 5.0kb upstream 11337 true Scaffold1655: 52989-64325 Capsella grandiflora
Cagra.1655s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold1655: 59326-64325 Capsella grandiflora
Cagra.1655s0014 5.0kb downstream 5.0kb downstream 11337 true Scaffold1655: 47989-59325 Capsella grandiflora
Cagra.1655s0014 5.0kb downstream 5.0kb downstream 5000 false Scaffold1655: 47989-52988 Capsella grandiflora
Cagra.1655s0014 10.0kb upstream 10.0kb upstream 16337 true Scaffold1655: 52989-69325 Capsella grandiflora
Cagra.1655s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold1655: 59326-69325 Capsella grandiflora
Cagra.1655s0014 10.0kb downstream 10.0kb downstream 16337 true Scaffold1655: 42989-59325 Capsella grandiflora
Cagra.1655s0014 10.0kb downstream 10.0kb downstream 10000 false Scaffold1655: 42989-52988 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379038 5261 Brassicaceae View MSA
123837098 5264 Brassicales-Malvales View MSA
124338859 5266 SBM View MSA
124237079 5268 Malvidae View MSA
124063652 5270 Rosid View MSA
123740190 5271 Pentapetalae View MSA
122788808 5272 Eudicot View MSA
122047969 5273 Angiosperm View MSA
121348078 5274 Embryophyte View MSA
123380722 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain