Gene : Cagra.1655s0016 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23083:SF397 - UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE SPINDLY-RELATED Genomic Order:  16
Name:  ? Cagra.1655s0016 Secondary Identifier:  ? PAC:28902907
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7437 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1655s0016 0.5kb upstream 0.5kb upstream 6424 true Scaffold1655: 61057-67480 Capsella grandiflora
Cagra.1655s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold1655: 66981-67480 Capsella grandiflora
Cagra.1655s0016 0.5kb downstream 0.5kb downstream 6424 true Scaffold1655: 60557-66980 Capsella grandiflora
Cagra.1655s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold1655: 60557-61056 Capsella grandiflora
Cagra.1655s0016 1.0kb upstream 1.0kb upstream 6924 true Scaffold1655: 61057-67980 Capsella grandiflora
Cagra.1655s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold1655: 66981-67980 Capsella grandiflora
Cagra.1655s0016 1.0kb downstream 1.0kb downstream 6924 true Scaffold1655: 60057-66980 Capsella grandiflora
Cagra.1655s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold1655: 60057-61056 Capsella grandiflora
Cagra.1655s0016 2.0kb upstream 2.0kb upstream 7924 true Scaffold1655: 61057-68980 Capsella grandiflora
Cagra.1655s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold1655: 66981-68980 Capsella grandiflora
Cagra.1655s0016 2.0kb downstream 2.0kb downstream 7924 true Scaffold1655: 59057-66980 Capsella grandiflora
Cagra.1655s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold1655: 59057-61056 Capsella grandiflora
Cagra.1655s0016 5.0kb upstream 5.0kb upstream 10924 true Scaffold1655: 61057-71980 Capsella grandiflora
Cagra.1655s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold1655: 66981-71980 Capsella grandiflora
Cagra.1655s0016 5.0kb downstream 5.0kb downstream 10924 true Scaffold1655: 56057-66980 Capsella grandiflora
Cagra.1655s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold1655: 56057-61056 Capsella grandiflora
Cagra.1655s0016 10.0kb upstream 10.0kb upstream 15924 true Scaffold1655: 61057-76980 Capsella grandiflora
Cagra.1655s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold1655: 66981-76980 Capsella grandiflora
Cagra.1655s0016 10.0kb downstream 10.0kb downstream 15924 true Scaffold1655: 51057-66980 Capsella grandiflora
Cagra.1655s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold1655: 51057-61056 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377514 5261 Brassicaceae View MSA
123839299 5264 Brassicales-Malvales View MSA
124342319 5266 SBM View MSA
124237438 5268 Malvidae View MSA
124065064 5270 Rosid View MSA
123739134 5271 Pentapetalae View MSA
122791595 5272 Eudicot View MSA
122044417 5273 Angiosperm View MSA
121347707 5274 Embryophyte View MSA
123428836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain