Gene : Cagra.1655s0020 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10553//PTHR10553:SF9 - SMALL NUCLEAR RIBONUCLEOPROTEIN Genomic Order:  20
Name:  ? Cagra.1655s0020 Secondary Identifier:  ? PAC:28902876
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1655s0020 0.5kb upstream 0.5kb upstream 1571 true Scaffold1655: 75937-77507 Capsella grandiflora
Cagra.1655s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold1655: 75937-76436 Capsella grandiflora
Cagra.1655s0020 0.5kb downstream 0.5kb downstream 1571 true Scaffold1655: 76437-78007 Capsella grandiflora
Cagra.1655s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold1655: 77508-78007 Capsella grandiflora
Cagra.1655s0020 1.0kb upstream 1.0kb upstream 2071 true Scaffold1655: 75437-77507 Capsella grandiflora
Cagra.1655s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold1655: 75437-76436 Capsella grandiflora
Cagra.1655s0020 1.0kb downstream 1.0kb downstream 2071 true Scaffold1655: 76437-78507 Capsella grandiflora
Cagra.1655s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold1655: 77508-78507 Capsella grandiflora
Cagra.1655s0020 2.0kb upstream 2.0kb upstream 3071 true Scaffold1655: 74437-77507 Capsella grandiflora
Cagra.1655s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold1655: 74437-76436 Capsella grandiflora
Cagra.1655s0020 2.0kb downstream 2.0kb downstream 3071 true Scaffold1655: 76437-79507 Capsella grandiflora
Cagra.1655s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold1655: 77508-79507 Capsella grandiflora
Cagra.1655s0020 5.0kb upstream 5.0kb upstream 6071 true Scaffold1655: 71437-77507 Capsella grandiflora
Cagra.1655s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold1655: 71437-76436 Capsella grandiflora
Cagra.1655s0020 5.0kb downstream 5.0kb downstream 6071 true Scaffold1655: 76437-82507 Capsella grandiflora
Cagra.1655s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold1655: 77508-82507 Capsella grandiflora
Cagra.1655s0020 10.0kb upstream 10.0kb upstream 11071 true Scaffold1655: 66437-77507 Capsella grandiflora
Cagra.1655s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold1655: 66437-76436 Capsella grandiflora
Cagra.1655s0020 10.0kb downstream 10.0kb downstream 11071 true Scaffold1655: 76437-87507 Capsella grandiflora
Cagra.1655s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold1655: 77508-87507 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377990 5261 Brassicaceae View MSA
123831020 5264 Brassicales-Malvales View MSA
124342912 5266 SBM View MSA
124250166 5268 Malvidae View MSA
124063734 5270 Rosid View MSA
123743762 5271 Pentapetalae View MSA
122792328 5272 Eudicot View MSA
122043124 5273 Angiosperm View MSA
121347194 5274 Embryophyte View MSA
123426460 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain