Gene : Cagra.1655s0042 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11709//PTHR11709:SF80 - MULTI-COPPER OXIDASE Genomic Order:  42
Name:  ? Cagra.1655s0042 Secondary Identifier:  ? PAC:28902865
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5466 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1655s0042 0.5kb upstream 0.5kb upstream 2666 true Scaffold1655: 159671-162336 Capsella grandiflora
Cagra.1655s0042 0.5kb upstream 0.5kb upstream 500 false Scaffold1655: 159671-160170 Capsella grandiflora
Cagra.1655s0042 0.5kb downstream 0.5kb downstream 2666 true Scaffold1655: 160171-162836 Capsella grandiflora
Cagra.1655s0042 0.5kb downstream 0.5kb downstream 500 false Scaffold1655: 162337-162836 Capsella grandiflora
Cagra.1655s0042 1.0kb upstream 1.0kb upstream 3166 true Scaffold1655: 159171-162336 Capsella grandiflora
Cagra.1655s0042 1.0kb upstream 1.0kb upstream 1000 false Scaffold1655: 159171-160170 Capsella grandiflora
Cagra.1655s0042 1.0kb downstream 1.0kb downstream 3166 true Scaffold1655: 160171-163336 Capsella grandiflora
Cagra.1655s0042 1.0kb downstream 1.0kb downstream 1000 false Scaffold1655: 162337-163336 Capsella grandiflora
Cagra.1655s0042 2.0kb upstream 2.0kb upstream 4166 true Scaffold1655: 158171-162336 Capsella grandiflora
Cagra.1655s0042 2.0kb upstream 2.0kb upstream 2000 false Scaffold1655: 158171-160170 Capsella grandiflora
Cagra.1655s0042 2.0kb downstream 2.0kb downstream 4166 true Scaffold1655: 160171-164336 Capsella grandiflora
Cagra.1655s0042 2.0kb downstream 2.0kb downstream 2000 false Scaffold1655: 162337-164336 Capsella grandiflora
Cagra.1655s0042 5.0kb upstream 5.0kb upstream 7166 true Scaffold1655: 155171-162336 Capsella grandiflora
Cagra.1655s0042 5.0kb upstream 5.0kb upstream 5000 false Scaffold1655: 155171-160170 Capsella grandiflora
Cagra.1655s0042 5.0kb downstream 5.0kb downstream 7166 true Scaffold1655: 160171-167336 Capsella grandiflora
Cagra.1655s0042 5.0kb downstream 5.0kb downstream 5000 false Scaffold1655: 162337-167336 Capsella grandiflora
Cagra.1655s0042 10.0kb upstream 10.0kb upstream 12166 true Scaffold1655: 150171-162336 Capsella grandiflora
Cagra.1655s0042 10.0kb upstream 10.0kb upstream 10000 false Scaffold1655: 150171-160170 Capsella grandiflora
Cagra.1655s0042 10.0kb downstream 10.0kb downstream 12166 true Scaffold1655: 160171-172336 Capsella grandiflora
Cagra.1655s0042 10.0kb downstream 10.0kb downstream 10000 false Scaffold1655: 162337-172336 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779717 5273 Angiosperm View MSA
122379994 5261 Brassicaceae View MSA
123837948 5264 Brassicales-Malvales View MSA
124348390 5266 SBM View MSA
124245953 5268 Malvidae View MSA
124070050 5270 Rosid View MSA
123743966 5271 Pentapetalae View MSA
122770838 5272 Eudicot View MSA
121051361 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain