Gene : Cagra.1655s0043 C. grandiflora v1.1

Defline:  (1 of 7) PTHR24078:SF261 - DNAJ (HSP40) HOMOLOG, SUBFAMILY A, MEMBER 3A Genomic Order:  43
Name:  ? Cagra.1655s0043 Secondary Identifier:  ? PAC:28902887

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1655s0043 0.5kb upstream 0.5kb upstream 2126 true Scaffold1655: 162753-164878 Capsella grandiflora
Cagra.1655s0043 0.5kb upstream 0.5kb upstream 500 false Scaffold1655: 162753-163252 Capsella grandiflora
Cagra.1655s0043 0.5kb downstream 0.5kb downstream 2126 true Scaffold1655: 163253-165378 Capsella grandiflora
Cagra.1655s0043 0.5kb downstream 0.5kb downstream 500 false Scaffold1655: 164879-165378 Capsella grandiflora
Cagra.1655s0043 1.0kb upstream 1.0kb upstream 2626 true Scaffold1655: 162253-164878 Capsella grandiflora
Cagra.1655s0043 1.0kb upstream 1.0kb upstream 1000 false Scaffold1655: 162253-163252 Capsella grandiflora
Cagra.1655s0043 1.0kb downstream 1.0kb downstream 2626 true Scaffold1655: 163253-165878 Capsella grandiflora
Cagra.1655s0043 1.0kb downstream 1.0kb downstream 1000 false Scaffold1655: 164879-165878 Capsella grandiflora
Cagra.1655s0043 2.0kb upstream 2.0kb upstream 3626 true Scaffold1655: 161253-164878 Capsella grandiflora
Cagra.1655s0043 2.0kb upstream 2.0kb upstream 2000 false Scaffold1655: 161253-163252 Capsella grandiflora
Cagra.1655s0043 2.0kb downstream 2.0kb downstream 3626 true Scaffold1655: 163253-166878 Capsella grandiflora
Cagra.1655s0043 2.0kb downstream 2.0kb downstream 2000 false Scaffold1655: 164879-166878 Capsella grandiflora
Cagra.1655s0043 5.0kb upstream 5.0kb upstream 6626 true Scaffold1655: 158253-164878 Capsella grandiflora
Cagra.1655s0043 5.0kb upstream 5.0kb upstream 5000 false Scaffold1655: 158253-163252 Capsella grandiflora
Cagra.1655s0043 5.0kb downstream 5.0kb downstream 6626 true Scaffold1655: 163253-169878 Capsella grandiflora
Cagra.1655s0043 5.0kb downstream 5.0kb downstream 5000 false Scaffold1655: 164879-169878 Capsella grandiflora
Cagra.1655s0043 10.0kb upstream 10.0kb upstream 11626 true Scaffold1655: 153253-164878 Capsella grandiflora
Cagra.1655s0043 10.0kb upstream 10.0kb upstream 10000 false Scaffold1655: 153253-163252 Capsella grandiflora
Cagra.1655s0043 10.0kb downstream 10.0kb downstream 11626 true Scaffold1655: 163253-174878 Capsella grandiflora
Cagra.1655s0043 10.0kb downstream 10.0kb downstream 10000 false Scaffold1655: 164879-174878 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792864 5273 Angiosperm View MSA
122371027 5261 Brassicaceae View MSA
123835671 5264 Brassicales-Malvales View MSA
124347714 5266 SBM View MSA
124245031 5268 Malvidae View MSA
124064393 5270 Rosid View MSA
123746723 5271 Pentapetalae View MSA
122798692 5272 Eudicot View MSA
121064059 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain