Gene : Cagra.1636s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31096:SF6 - ACR7-RELATED Genomic Order:  3
Name:  ? Cagra.1636s0003 Secondary Identifier:  ? PAC:28903989
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1636s0003 0.5kb upstream 0.5kb upstream 3347 true Scaffold1636: 8042-11388 Capsella grandiflora
Cagra.1636s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold1636: 8042-8541 Capsella grandiflora
Cagra.1636s0003 0.5kb downstream 0.5kb downstream 3347 true Scaffold1636: 8542-11888 Capsella grandiflora
Cagra.1636s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold1636: 11389-11888 Capsella grandiflora
Cagra.1636s0003 1.0kb upstream 1.0kb upstream 3847 true Scaffold1636: 7542-11388 Capsella grandiflora
Cagra.1636s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold1636: 7542-8541 Capsella grandiflora
Cagra.1636s0003 1.0kb downstream 1.0kb downstream 3847 true Scaffold1636: 8542-12388 Capsella grandiflora
Cagra.1636s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold1636: 11389-12388 Capsella grandiflora
Cagra.1636s0003 2.0kb upstream 2.0kb upstream 4847 true Scaffold1636: 6542-11388 Capsella grandiflora
Cagra.1636s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold1636: 6542-8541 Capsella grandiflora
Cagra.1636s0003 2.0kb downstream 2.0kb downstream 4847 true Scaffold1636: 8542-13388 Capsella grandiflora
Cagra.1636s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold1636: 11389-13388 Capsella grandiflora
Cagra.1636s0003 5.0kb upstream 5.0kb upstream 7847 true Scaffold1636: 3542-11388 Capsella grandiflora
Cagra.1636s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold1636: 3542-8541 Capsella grandiflora
Cagra.1636s0003 5.0kb downstream 5.0kb downstream 7847 true Scaffold1636: 8542-16388 Capsella grandiflora
Cagra.1636s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold1636: 11389-16388 Capsella grandiflora
Cagra.1636s0003 10.0kb upstream 10.0kb upstream 11388 true Scaffold1636: 1-11388 Capsella grandiflora
Cagra.1636s0003 10.0kb upstream 10.0kb upstream 8541 false Scaffold1636: 1-8541 Capsella grandiflora
Cagra.1636s0003 10.0kb downstream 10.0kb downstream 12847 true Scaffold1636: 8542-21388 Capsella grandiflora
Cagra.1636s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold1636: 11389-21388 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360863 5261 Brassicaceae View MSA
123838651 5264 Brassicales-Malvales View MSA
124338176 5266 SBM View MSA
124244416 5268 Malvidae View MSA
124062549 5270 Rosid View MSA
123746223 5271 Pentapetalae View MSA
122793318 5272 Eudicot View MSA
122043779 5273 Angiosperm View MSA
121310188 5274 Embryophyte View MSA
123428468 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain