Gene : Cagra.1636s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31500:SF7 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Genomic Order:  4
Name:  ? Cagra.1636s0004 Secondary Identifier:  ? PAC:28903990
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1636s0004 0.5kb upstream 0.5kb upstream 2381 true Scaffold1636: 14394-16774 Capsella grandiflora
Cagra.1636s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1636: 14394-14893 Capsella grandiflora
Cagra.1636s0004 0.5kb downstream 0.5kb downstream 2381 true Scaffold1636: 14894-17274 Capsella grandiflora
Cagra.1636s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1636: 16775-17274 Capsella grandiflora
Cagra.1636s0004 1.0kb upstream 1.0kb upstream 2881 true Scaffold1636: 13894-16774 Capsella grandiflora
Cagra.1636s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1636: 13894-14893 Capsella grandiflora
Cagra.1636s0004 1.0kb downstream 1.0kb downstream 2881 true Scaffold1636: 14894-17774 Capsella grandiflora
Cagra.1636s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1636: 16775-17774 Capsella grandiflora
Cagra.1636s0004 2.0kb upstream 2.0kb upstream 3881 true Scaffold1636: 12894-16774 Capsella grandiflora
Cagra.1636s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1636: 12894-14893 Capsella grandiflora
Cagra.1636s0004 2.0kb downstream 2.0kb downstream 3881 true Scaffold1636: 14894-18774 Capsella grandiflora
Cagra.1636s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1636: 16775-18774 Capsella grandiflora
Cagra.1636s0004 5.0kb upstream 5.0kb upstream 6881 true Scaffold1636: 9894-16774 Capsella grandiflora
Cagra.1636s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1636: 9894-14893 Capsella grandiflora
Cagra.1636s0004 5.0kb downstream 5.0kb downstream 6881 true Scaffold1636: 14894-21774 Capsella grandiflora
Cagra.1636s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1636: 16775-21774 Capsella grandiflora
Cagra.1636s0004 10.0kb upstream 10.0kb upstream 11881 true Scaffold1636: 4894-16774 Capsella grandiflora
Cagra.1636s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1636: 4894-14893 Capsella grandiflora
Cagra.1636s0004 10.0kb downstream 10.0kb downstream 11881 true Scaffold1636: 14894-26774 Capsella grandiflora
Cagra.1636s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1636: 16775-26774 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360893 5261 Brassicaceae View MSA
123841387 5264 Brassicales-Malvales View MSA
124348766 5266 SBM View MSA
124248140 5268 Malvidae View MSA
124071035 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain