Gene : Cagra.1637s0008 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12634:SF8 - PROTEIN SAPS-1, ISOFORM C Genomic Order:  8
Name:  ? Cagra.1637s0008 Secondary Identifier:  ? PAC:28897808
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1637s0008 0.5kb upstream 0.5kb upstream 6550 true Scaffold1637: 23318-29867 Capsella grandiflora
Cagra.1637s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold1637: 23318-23817 Capsella grandiflora
Cagra.1637s0008 0.5kb downstream 0.5kb downstream 6550 true Scaffold1637: 23818-30367 Capsella grandiflora
Cagra.1637s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold1637: 29868-30367 Capsella grandiflora
Cagra.1637s0008 1.0kb upstream 1.0kb upstream 7050 true Scaffold1637: 22818-29867 Capsella grandiflora
Cagra.1637s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold1637: 22818-23817 Capsella grandiflora
Cagra.1637s0008 1.0kb downstream 1.0kb downstream 7050 true Scaffold1637: 23818-30867 Capsella grandiflora
Cagra.1637s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold1637: 29868-30867 Capsella grandiflora
Cagra.1637s0008 2.0kb upstream 2.0kb upstream 8050 true Scaffold1637: 21818-29867 Capsella grandiflora
Cagra.1637s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold1637: 21818-23817 Capsella grandiflora
Cagra.1637s0008 2.0kb downstream 2.0kb downstream 8050 true Scaffold1637: 23818-31867 Capsella grandiflora
Cagra.1637s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold1637: 29868-31867 Capsella grandiflora
Cagra.1637s0008 5.0kb upstream 5.0kb upstream 11050 true Scaffold1637: 18818-29867 Capsella grandiflora
Cagra.1637s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold1637: 18818-23817 Capsella grandiflora
Cagra.1637s0008 5.0kb downstream 5.0kb downstream 11050 true Scaffold1637: 23818-34867 Capsella grandiflora
Cagra.1637s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold1637: 29868-34867 Capsella grandiflora
Cagra.1637s0008 10.0kb upstream 10.0kb upstream 16050 true Scaffold1637: 13818-29867 Capsella grandiflora
Cagra.1637s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold1637: 13818-23817 Capsella grandiflora
Cagra.1637s0008 10.0kb downstream 10.0kb downstream 16050 true Scaffold1637: 23818-39867 Capsella grandiflora
Cagra.1637s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold1637: 29868-39867 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361950 5261 Brassicaceae View MSA
123830046 5264 Brassicales-Malvales View MSA
124338186 5266 SBM View MSA
124241932 5268 Malvidae View MSA
124069403 5270 Rosid View MSA
123742234 5271 Pentapetalae View MSA
122794805 5272 Eudicot View MSA
122051052 5273 Angiosperm View MSA
121347725 5274 Embryophyte View MSA
123428189 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain