Gene : Cagra.1637s0013 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10799:SF620 - DEFECTIVE CHORION-1 PROTEIN, FC177 ISOFORM Genomic Order:  13
Name:  ? Cagra.1637s0013 Secondary Identifier:  ? PAC:28897810
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1637s0013 0.5kb upstream 0.5kb upstream 9442 true Scaffold1637: 48912-58353 Capsella grandiflora
Cagra.1637s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold1637: 57854-58353 Capsella grandiflora
Cagra.1637s0013 0.5kb downstream 0.5kb downstream 9442 true Scaffold1637: 48412-57853 Capsella grandiflora
Cagra.1637s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold1637: 48412-48911 Capsella grandiflora
Cagra.1637s0013 1.0kb upstream 1.0kb upstream 9942 true Scaffold1637: 48912-58853 Capsella grandiflora
Cagra.1637s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold1637: 57854-58853 Capsella grandiflora
Cagra.1637s0013 1.0kb downstream 1.0kb downstream 9942 true Scaffold1637: 47912-57853 Capsella grandiflora
Cagra.1637s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold1637: 47912-48911 Capsella grandiflora
Cagra.1637s0013 2.0kb upstream 2.0kb upstream 10942 true Scaffold1637: 48912-59853 Capsella grandiflora
Cagra.1637s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold1637: 57854-59853 Capsella grandiflora
Cagra.1637s0013 2.0kb downstream 2.0kb downstream 10942 true Scaffold1637: 46912-57853 Capsella grandiflora
Cagra.1637s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold1637: 46912-48911 Capsella grandiflora
Cagra.1637s0013 5.0kb upstream 5.0kb upstream 13942 true Scaffold1637: 48912-62853 Capsella grandiflora
Cagra.1637s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold1637: 57854-62853 Capsella grandiflora
Cagra.1637s0013 5.0kb downstream 5.0kb downstream 13942 true Scaffold1637: 43912-57853 Capsella grandiflora
Cagra.1637s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold1637: 43912-48911 Capsella grandiflora
Cagra.1637s0013 10.0kb upstream 10.0kb upstream 18942 true Scaffold1637: 48912-67853 Capsella grandiflora
Cagra.1637s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold1637: 57854-67853 Capsella grandiflora
Cagra.1637s0013 10.0kb downstream 10.0kb downstream 18942 true Scaffold1637: 38912-57853 Capsella grandiflora
Cagra.1637s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold1637: 38912-48911 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380505 5261 Brassicaceae View MSA
123838774 5264 Brassicales-Malvales View MSA
124346968 5266 SBM View MSA
124253309 5268 Malvidae View MSA
124069774 5270 Rosid View MSA
123750544 5271 Pentapetalae View MSA
122796032 5272 Eudicot View MSA
122043248 5273 Angiosperm View MSA
121351152 5274 Embryophyte View MSA
123382029 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain