Gene : Cagra.1642s0004 C. grandiflora v1.1
Defline:  (1 of 3) 3.1.31.1 - Micrococcal nuclease / Micrococcal endonuclease Genomic Order:  4
Name:  ? Cagra.1642s0004 Secondary Identifier:  ? PAC:28898893
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1642s0004 0.5kb upstream 0.5kb upstream 2412 true Scaffold1642: 7356-9767 Capsella grandiflora
Cagra.1642s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1642: 7356-7855 Capsella grandiflora
Cagra.1642s0004 0.5kb downstream 0.5kb downstream 2412 true Scaffold1642: 7856-10267 Capsella grandiflora
Cagra.1642s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1642: 9768-10267 Capsella grandiflora
Cagra.1642s0004 1.0kb upstream 1.0kb upstream 2912 true Scaffold1642: 6856-9767 Capsella grandiflora
Cagra.1642s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1642: 6856-7855 Capsella grandiflora
Cagra.1642s0004 1.0kb downstream 1.0kb downstream 2912 true Scaffold1642: 7856-10767 Capsella grandiflora
Cagra.1642s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1642: 9768-10767 Capsella grandiflora
Cagra.1642s0004 2.0kb upstream 2.0kb upstream 3912 true Scaffold1642: 5856-9767 Capsella grandiflora
Cagra.1642s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1642: 5856-7855 Capsella grandiflora
Cagra.1642s0004 2.0kb downstream 2.0kb downstream 3912 true Scaffold1642: 7856-11767 Capsella grandiflora
Cagra.1642s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1642: 9768-11767 Capsella grandiflora
Cagra.1642s0004 5.0kb upstream 5.0kb upstream 6912 true Scaffold1642: 2856-9767 Capsella grandiflora
Cagra.1642s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1642: 2856-7855 Capsella grandiflora
Cagra.1642s0004 5.0kb downstream 5.0kb downstream 6912 true Scaffold1642: 7856-14767 Capsella grandiflora
Cagra.1642s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1642: 9768-14767 Capsella grandiflora
Cagra.1642s0004 10.0kb upstream 10.0kb upstream 9767 true Scaffold1642: 1-9767 Capsella grandiflora
Cagra.1642s0004 10.0kb upstream 10.0kb upstream 7855 false Scaffold1642: 1-7855 Capsella grandiflora
Cagra.1642s0004 10.0kb downstream 10.0kb downstream 11912 true Scaffold1642: 7856-19767 Capsella grandiflora
Cagra.1642s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1642: 9768-19767 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365530 5261 Brassicaceae View MSA
123837266 5264 Brassicales-Malvales View MSA
124336763 5266 SBM View MSA
124243728 5268 Malvidae View MSA
124062964 5270 Rosid View MSA
123736698 5271 Pentapetalae View MSA
122792401 5272 Eudicot View MSA
122046760 5273 Angiosperm View MSA
121347603 5274 Embryophyte View MSA
123428455 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain