Gene : Cagra.1642s0010 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31301:SF2 - LOB DOMAIN-CONTAINING PROTEIN 15 Genomic Order:  10
Name:  ? Cagra.1642s0010 Secondary Identifier:  ? PAC:28898859
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1642s0010 0.5kb upstream 0.5kb upstream 1485 true Scaffold1642: 34444-35928 Capsella grandiflora
Cagra.1642s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold1642: 35429-35928 Capsella grandiflora
Cagra.1642s0010 0.5kb downstream 0.5kb downstream 1485 true Scaffold1642: 33944-35428 Capsella grandiflora
Cagra.1642s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold1642: 33944-34443 Capsella grandiflora
Cagra.1642s0010 1.0kb upstream 1.0kb upstream 1985 true Scaffold1642: 34444-36428 Capsella grandiflora
Cagra.1642s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold1642: 35429-36428 Capsella grandiflora
Cagra.1642s0010 1.0kb downstream 1.0kb downstream 1985 true Scaffold1642: 33444-35428 Capsella grandiflora
Cagra.1642s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold1642: 33444-34443 Capsella grandiflora
Cagra.1642s0010 2.0kb upstream 2.0kb upstream 2985 true Scaffold1642: 34444-37428 Capsella grandiflora
Cagra.1642s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold1642: 35429-37428 Capsella grandiflora
Cagra.1642s0010 2.0kb downstream 2.0kb downstream 2985 true Scaffold1642: 32444-35428 Capsella grandiflora
Cagra.1642s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold1642: 32444-34443 Capsella grandiflora
Cagra.1642s0010 5.0kb upstream 5.0kb upstream 5985 true Scaffold1642: 34444-40428 Capsella grandiflora
Cagra.1642s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold1642: 35429-40428 Capsella grandiflora
Cagra.1642s0010 5.0kb downstream 5.0kb downstream 5985 true Scaffold1642: 29444-35428 Capsella grandiflora
Cagra.1642s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold1642: 29444-34443 Capsella grandiflora
Cagra.1642s0010 10.0kb upstream 10.0kb upstream 10985 true Scaffold1642: 34444-45428 Capsella grandiflora
Cagra.1642s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold1642: 35429-45428 Capsella grandiflora
Cagra.1642s0010 10.0kb downstream 10.0kb downstream 10985 true Scaffold1642: 24444-35428 Capsella grandiflora
Cagra.1642s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold1642: 24444-34443 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376227 5261 Brassicaceae View MSA
123831721 5264 Brassicales-Malvales View MSA
124337177 5266 SBM View MSA
124254106 5268 Malvidae View MSA
124067191 5270 Rosid View MSA
123746231 5271 Pentapetalae View MSA
122789083 5272 Eudicot View MSA
122043702 5273 Angiosperm View MSA
121351035 5274 Embryophyte View MSA
123381985 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain