Gene : Cagra.1642s0015 C. grandiflora v1.1
Defline:  (1 of 3) PTHR23092:SF30 - NUCLEOTIDYLTRANSFERASE FAMILY PROTEIN-RELATED Genomic Order:  15
Name:  ? Cagra.1642s0015 Secondary Identifier:  ? PAC:28898898
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1642s0015 0.5kb upstream 0.5kb upstream 3927 true Scaffold1642: 52261-56187 Capsella grandiflora
Cagra.1642s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold1642: 52261-52760 Capsella grandiflora
Cagra.1642s0015 0.5kb downstream 0.5kb downstream 3927 true Scaffold1642: 52761-56687 Capsella grandiflora
Cagra.1642s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold1642: 56188-56687 Capsella grandiflora
Cagra.1642s0015 1.0kb upstream 1.0kb upstream 4427 true Scaffold1642: 51761-56187 Capsella grandiflora
Cagra.1642s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold1642: 51761-52760 Capsella grandiflora
Cagra.1642s0015 1.0kb downstream 1.0kb downstream 4427 true Scaffold1642: 52761-57187 Capsella grandiflora
Cagra.1642s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold1642: 56188-57187 Capsella grandiflora
Cagra.1642s0015 2.0kb upstream 2.0kb upstream 5427 true Scaffold1642: 50761-56187 Capsella grandiflora
Cagra.1642s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold1642: 50761-52760 Capsella grandiflora
Cagra.1642s0015 2.0kb downstream 2.0kb downstream 5427 true Scaffold1642: 52761-58187 Capsella grandiflora
Cagra.1642s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold1642: 56188-58187 Capsella grandiflora
Cagra.1642s0015 5.0kb upstream 5.0kb upstream 8427 true Scaffold1642: 47761-56187 Capsella grandiflora
Cagra.1642s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold1642: 47761-52760 Capsella grandiflora
Cagra.1642s0015 5.0kb downstream 5.0kb downstream 8427 true Scaffold1642: 52761-61187 Capsella grandiflora
Cagra.1642s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold1642: 56188-61187 Capsella grandiflora
Cagra.1642s0015 10.0kb upstream 10.0kb upstream 13427 true Scaffold1642: 42761-56187 Capsella grandiflora
Cagra.1642s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold1642: 42761-52760 Capsella grandiflora
Cagra.1642s0015 10.0kb downstream 10.0kb downstream 13427 true Scaffold1642: 52761-66187 Capsella grandiflora
Cagra.1642s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold1642: 56188-66187 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372567 5261 Brassicaceae View MSA
123800388 5264 Brassicales-Malvales View MSA
124297804 5266 SBM View MSA
124251652 5268 Malvidae View MSA
124069788 5270 Rosid View MSA
123744457 5271 Pentapetalae View MSA
122791987 5272 Eudicot View MSA
122043315 5273 Angiosperm View MSA
121310107 5274 Embryophyte View MSA
123428025 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain