Gene : Cagra.1642s0012 C. grandiflora v1.1
Defline:  (1 of 12) PF05701 - Weak chloroplast movement under blue light (WEMBL) Genomic Order:  12
Name:  ? Cagra.1642s0012 Secondary Identifier:  ? PAC:28898892
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1642s0012 0.5kb upstream 0.5kb upstream 2708 true Scaffold1642: 41739-44446 Capsella grandiflora
Cagra.1642s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold1642: 41739-42238 Capsella grandiflora
Cagra.1642s0012 0.5kb downstream 0.5kb downstream 2708 true Scaffold1642: 42239-44946 Capsella grandiflora
Cagra.1642s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold1642: 44447-44946 Capsella grandiflora
Cagra.1642s0012 1.0kb upstream 1.0kb upstream 3208 true Scaffold1642: 41239-44446 Capsella grandiflora
Cagra.1642s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold1642: 41239-42238 Capsella grandiflora
Cagra.1642s0012 1.0kb downstream 1.0kb downstream 3208 true Scaffold1642: 42239-45446 Capsella grandiflora
Cagra.1642s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold1642: 44447-45446 Capsella grandiflora
Cagra.1642s0012 2.0kb upstream 2.0kb upstream 4208 true Scaffold1642: 40239-44446 Capsella grandiflora
Cagra.1642s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold1642: 40239-42238 Capsella grandiflora
Cagra.1642s0012 2.0kb downstream 2.0kb downstream 4208 true Scaffold1642: 42239-46446 Capsella grandiflora
Cagra.1642s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold1642: 44447-46446 Capsella grandiflora
Cagra.1642s0012 5.0kb upstream 5.0kb upstream 7208 true Scaffold1642: 37239-44446 Capsella grandiflora
Cagra.1642s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold1642: 37239-42238 Capsella grandiflora
Cagra.1642s0012 5.0kb downstream 5.0kb downstream 7208 true Scaffold1642: 42239-49446 Capsella grandiflora
Cagra.1642s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold1642: 44447-49446 Capsella grandiflora
Cagra.1642s0012 10.0kb upstream 10.0kb upstream 12208 true Scaffold1642: 32239-44446 Capsella grandiflora
Cagra.1642s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold1642: 32239-42238 Capsella grandiflora
Cagra.1642s0012 10.0kb downstream 10.0kb downstream 12208 true Scaffold1642: 42239-54446 Capsella grandiflora
Cagra.1642s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold1642: 44447-54446 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362069 5261 Brassicaceae View MSA
123836274 5264 Brassicales-Malvales View MSA
124342573 5266 SBM View MSA
124239640 5268 Malvidae View MSA
124068222 5270 Rosid View MSA
123738917 5271 Pentapetalae View MSA
122794264 5272 Eudicot View MSA
122043460 5273 Angiosperm View MSA
121351750 5274 Embryophyte View MSA
123382308 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain