Gene : Cagra.1642s0024 C. grandiflora v1.1
Defline:  (1 of 5) PTHR11106 - GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED Genomic Order:  24
Name:  ? Cagra.1642s0024 Secondary Identifier:  ? PAC:28898901
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1642s0024 0.5kb upstream 0.5kb upstream 2291 true Scaffold1642: 78240-80530 Capsella grandiflora
Cagra.1642s0024 0.5kb upstream 0.5kb upstream 500 false Scaffold1642: 80031-80530 Capsella grandiflora
Cagra.1642s0024 0.5kb downstream 0.5kb downstream 2291 true Scaffold1642: 77740-80030 Capsella grandiflora
Cagra.1642s0024 0.5kb downstream 0.5kb downstream 500 false Scaffold1642: 77740-78239 Capsella grandiflora
Cagra.1642s0024 1.0kb upstream 1.0kb upstream 2791 true Scaffold1642: 78240-81030 Capsella grandiflora
Cagra.1642s0024 1.0kb upstream 1.0kb upstream 1000 false Scaffold1642: 80031-81030 Capsella grandiflora
Cagra.1642s0024 1.0kb downstream 1.0kb downstream 2791 true Scaffold1642: 77240-80030 Capsella grandiflora
Cagra.1642s0024 1.0kb downstream 1.0kb downstream 1000 false Scaffold1642: 77240-78239 Capsella grandiflora
Cagra.1642s0024 2.0kb upstream 2.0kb upstream 3791 true Scaffold1642: 78240-82030 Capsella grandiflora
Cagra.1642s0024 2.0kb upstream 2.0kb upstream 2000 false Scaffold1642: 80031-82030 Capsella grandiflora
Cagra.1642s0024 2.0kb downstream 2.0kb downstream 3791 true Scaffold1642: 76240-80030 Capsella grandiflora
Cagra.1642s0024 2.0kb downstream 2.0kb downstream 2000 false Scaffold1642: 76240-78239 Capsella grandiflora
Cagra.1642s0024 5.0kb upstream 5.0kb upstream 6791 true Scaffold1642: 78240-85030 Capsella grandiflora
Cagra.1642s0024 5.0kb upstream 5.0kb upstream 5000 false Scaffold1642: 80031-85030 Capsella grandiflora
Cagra.1642s0024 5.0kb downstream 5.0kb downstream 6791 true Scaffold1642: 73240-80030 Capsella grandiflora
Cagra.1642s0024 5.0kb downstream 5.0kb downstream 5000 false Scaffold1642: 73240-78239 Capsella grandiflora
Cagra.1642s0024 10.0kb upstream 10.0kb upstream 11791 true Scaffold1642: 78240-90030 Capsella grandiflora
Cagra.1642s0024 10.0kb upstream 10.0kb upstream 10000 false Scaffold1642: 80031-90030 Capsella grandiflora
Cagra.1642s0024 10.0kb downstream 10.0kb downstream 11791 true Scaffold1642: 68240-80030 Capsella grandiflora
Cagra.1642s0024 10.0kb downstream 10.0kb downstream 10000 false Scaffold1642: 68240-78239 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366491 5261 Brassicaceae View MSA
123839273 5264 Brassicales-Malvales View MSA
124337612 5266 SBM View MSA
124242045 5268 Malvidae View MSA
124063406 5270 Rosid View MSA
123746303 5271 Pentapetalae View MSA
122790136 5272 Eudicot View MSA
122047973 5273 Angiosperm View MSA
121350961 5274 Embryophyte View MSA
123428110 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain