Gene : Cagra.1642s0027 C. grandiflora v1.1
Defline:  (1 of 60) PF00170 - bZIP transcription factor (bZIP_1) Genomic Order:  27
Name:  ? Cagra.1642s0027 Secondary Identifier:  ? PAC:28898890
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1642s0027 0.5kb upstream 0.5kb upstream 3245 true Scaffold1642: 86087-89331 Capsella grandiflora
Cagra.1642s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold1642: 88832-89331 Capsella grandiflora
Cagra.1642s0027 0.5kb downstream 0.5kb downstream 3245 true Scaffold1642: 85587-88831 Capsella grandiflora
Cagra.1642s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold1642: 85587-86086 Capsella grandiflora
Cagra.1642s0027 1.0kb upstream 1.0kb upstream 3745 true Scaffold1642: 86087-89831 Capsella grandiflora
Cagra.1642s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold1642: 88832-89831 Capsella grandiflora
Cagra.1642s0027 1.0kb downstream 1.0kb downstream 3745 true Scaffold1642: 85087-88831 Capsella grandiflora
Cagra.1642s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold1642: 85087-86086 Capsella grandiflora
Cagra.1642s0027 2.0kb upstream 2.0kb upstream 4745 true Scaffold1642: 86087-90831 Capsella grandiflora
Cagra.1642s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold1642: 88832-90831 Capsella grandiflora
Cagra.1642s0027 2.0kb downstream 2.0kb downstream 4745 true Scaffold1642: 84087-88831 Capsella grandiflora
Cagra.1642s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold1642: 84087-86086 Capsella grandiflora
Cagra.1642s0027 5.0kb upstream 5.0kb upstream 7745 true Scaffold1642: 86087-93831 Capsella grandiflora
Cagra.1642s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold1642: 88832-93831 Capsella grandiflora
Cagra.1642s0027 5.0kb downstream 5.0kb downstream 7745 true Scaffold1642: 81087-88831 Capsella grandiflora
Cagra.1642s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold1642: 81087-86086 Capsella grandiflora
Cagra.1642s0027 10.0kb upstream 10.0kb upstream 12745 true Scaffold1642: 86087-98831 Capsella grandiflora
Cagra.1642s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold1642: 88832-98831 Capsella grandiflora
Cagra.1642s0027 10.0kb downstream 10.0kb downstream 12745 true Scaffold1642: 76087-88831 Capsella grandiflora
Cagra.1642s0027 10.0kb downstream 10.0kb downstream 10000 false Scaffold1642: 76087-86086 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363706 5261 Brassicaceae View MSA
123840975 5264 Brassicales-Malvales View MSA
124337734 5266 SBM View MSA
124243737 5268 Malvidae View MSA
124064643 5270 Rosid View MSA
123746615 5271 Pentapetalae View MSA
122797206 5272 Eudicot View MSA
122046720 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121310646 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain