Gene : Cagra.1642s0026 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31867:SF22 - EXPANSIN-A8 Genomic Order:  26
Name:  ? Cagra.1642s0026 Secondary Identifier:  ? PAC:28898842
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1642s0026 0.5kb upstream 0.5kb upstream 1784 true Scaffold1642: 81744-83527 Capsella grandiflora
Cagra.1642s0026 0.5kb upstream 0.5kb upstream 500 false Scaffold1642: 83028-83527 Capsella grandiflora
Cagra.1642s0026 0.5kb downstream 0.5kb downstream 1784 true Scaffold1642: 81244-83027 Capsella grandiflora
Cagra.1642s0026 0.5kb downstream 0.5kb downstream 500 false Scaffold1642: 81244-81743 Capsella grandiflora
Cagra.1642s0026 1.0kb upstream 1.0kb upstream 2284 true Scaffold1642: 81744-84027 Capsella grandiflora
Cagra.1642s0026 1.0kb upstream 1.0kb upstream 1000 false Scaffold1642: 83028-84027 Capsella grandiflora
Cagra.1642s0026 1.0kb downstream 1.0kb downstream 2284 true Scaffold1642: 80744-83027 Capsella grandiflora
Cagra.1642s0026 1.0kb downstream 1.0kb downstream 1000 false Scaffold1642: 80744-81743 Capsella grandiflora
Cagra.1642s0026 2.0kb upstream 2.0kb upstream 3284 true Scaffold1642: 81744-85027 Capsella grandiflora
Cagra.1642s0026 2.0kb upstream 2.0kb upstream 2000 false Scaffold1642: 83028-85027 Capsella grandiflora
Cagra.1642s0026 2.0kb downstream 2.0kb downstream 3284 true Scaffold1642: 79744-83027 Capsella grandiflora
Cagra.1642s0026 2.0kb downstream 2.0kb downstream 2000 false Scaffold1642: 79744-81743 Capsella grandiflora
Cagra.1642s0026 5.0kb upstream 5.0kb upstream 6284 true Scaffold1642: 81744-88027 Capsella grandiflora
Cagra.1642s0026 5.0kb upstream 5.0kb upstream 5000 false Scaffold1642: 83028-88027 Capsella grandiflora
Cagra.1642s0026 5.0kb downstream 5.0kb downstream 6284 true Scaffold1642: 76744-83027 Capsella grandiflora
Cagra.1642s0026 5.0kb downstream 5.0kb downstream 5000 false Scaffold1642: 76744-81743 Capsella grandiflora
Cagra.1642s0026 10.0kb upstream 10.0kb upstream 11284 true Scaffold1642: 81744-93027 Capsella grandiflora
Cagra.1642s0026 10.0kb upstream 10.0kb upstream 10000 false Scaffold1642: 83028-93027 Capsella grandiflora
Cagra.1642s0026 10.0kb downstream 10.0kb downstream 11284 true Scaffold1642: 71744-83027 Capsella grandiflora
Cagra.1642s0026 10.0kb downstream 10.0kb downstream 10000 false Scaffold1642: 71744-81743 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380816 5261 Brassicaceae View MSA
123839732 5264 Brassicales-Malvales View MSA
124349436 5266 SBM View MSA
124239479 5268 Malvidae View MSA
124070861 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain