Gene : Cagra.1642s0032 C. grandiflora v1.1
Defline:  (1 of 2) PTHR26402:SF521 - TWO-COMPONENT RESPONSE REGULATOR ARR16-RELATED Genomic Order:  32
Name:  ? Cagra.1642s0032 Secondary Identifier:  ? PAC:28898829
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1642s0032 0.5kb upstream 0.5kb upstream 1805 true Scaffold1642: 101678-103482 Capsella grandiflora
Cagra.1642s0032 0.5kb upstream 0.5kb upstream 500 false Scaffold1642: 101678-102177 Capsella grandiflora
Cagra.1642s0032 0.5kb downstream 0.5kb downstream 1805 true Scaffold1642: 102178-103982 Capsella grandiflora
Cagra.1642s0032 0.5kb downstream 0.5kb downstream 500 false Scaffold1642: 103483-103982 Capsella grandiflora
Cagra.1642s0032 1.0kb upstream 1.0kb upstream 2305 true Scaffold1642: 101178-103482 Capsella grandiflora
Cagra.1642s0032 1.0kb upstream 1.0kb upstream 1000 false Scaffold1642: 101178-102177 Capsella grandiflora
Cagra.1642s0032 1.0kb downstream 1.0kb downstream 2305 true Scaffold1642: 102178-104482 Capsella grandiflora
Cagra.1642s0032 1.0kb downstream 1.0kb downstream 1000 false Scaffold1642: 103483-104482 Capsella grandiflora
Cagra.1642s0032 2.0kb upstream 2.0kb upstream 3305 true Scaffold1642: 100178-103482 Capsella grandiflora
Cagra.1642s0032 2.0kb upstream 2.0kb upstream 2000 false Scaffold1642: 100178-102177 Capsella grandiflora
Cagra.1642s0032 2.0kb downstream 2.0kb downstream 3305 true Scaffold1642: 102178-105482 Capsella grandiflora
Cagra.1642s0032 2.0kb downstream 2.0kb downstream 2000 false Scaffold1642: 103483-105482 Capsella grandiflora
Cagra.1642s0032 5.0kb upstream 5.0kb upstream 6305 true Scaffold1642: 97178-103482 Capsella grandiflora
Cagra.1642s0032 5.0kb upstream 5.0kb upstream 5000 false Scaffold1642: 97178-102177 Capsella grandiflora
Cagra.1642s0032 5.0kb downstream 5.0kb downstream 6305 true Scaffold1642: 102178-108482 Capsella grandiflora
Cagra.1642s0032 5.0kb downstream 5.0kb downstream 5000 false Scaffold1642: 103483-108482 Capsella grandiflora
Cagra.1642s0032 10.0kb upstream 10.0kb upstream 11305 true Scaffold1642: 92178-103482 Capsella grandiflora
Cagra.1642s0032 10.0kb upstream 10.0kb upstream 10000 false Scaffold1642: 92178-102177 Capsella grandiflora
Cagra.1642s0032 10.0kb downstream 10.0kb downstream 11305 true Scaffold1642: 102178-113482 Capsella grandiflora
Cagra.1642s0032 10.0kb downstream 10.0kb downstream 10000 false Scaffold1642: 103483-113482 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375107 5261 Brassicaceae View MSA
123839154 5264 Brassicales-Malvales View MSA
124339072 5266 SBM View MSA
124249689 5268 Malvidae View MSA
124062080 5270 Rosid View MSA
123748366 5271 Pentapetalae View MSA
122792334 5272 Eudicot View MSA
122050729 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349796 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain