Gene : Cagra.1642s0044 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21641 - TRANSLATION INITIATION FACTOR-RELATED Genomic Order:  44
Name:  ? Cagra.1642s0044 Secondary Identifier:  ? PAC:28898887
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1642s0044 0.5kb upstream 0.5kb upstream 1791 true Scaffold1642: 147227-149017 Capsella grandiflora
Cagra.1642s0044 0.5kb upstream 0.5kb upstream 500 false Scaffold1642: 147227-147726 Capsella grandiflora
Cagra.1642s0044 0.5kb downstream 0.5kb downstream 1791 true Scaffold1642: 147727-149517 Capsella grandiflora
Cagra.1642s0044 0.5kb downstream 0.5kb downstream 500 false Scaffold1642: 149018-149517 Capsella grandiflora
Cagra.1642s0044 1.0kb upstream 1.0kb upstream 2291 true Scaffold1642: 146727-149017 Capsella grandiflora
Cagra.1642s0044 1.0kb upstream 1.0kb upstream 1000 false Scaffold1642: 146727-147726 Capsella grandiflora
Cagra.1642s0044 1.0kb downstream 1.0kb downstream 2291 true Scaffold1642: 147727-150017 Capsella grandiflora
Cagra.1642s0044 1.0kb downstream 1.0kb downstream 1000 false Scaffold1642: 149018-150017 Capsella grandiflora
Cagra.1642s0044 2.0kb upstream 2.0kb upstream 3291 true Scaffold1642: 145727-149017 Capsella grandiflora
Cagra.1642s0044 2.0kb upstream 2.0kb upstream 2000 false Scaffold1642: 145727-147726 Capsella grandiflora
Cagra.1642s0044 2.0kb downstream 2.0kb downstream 3291 true Scaffold1642: 147727-151017 Capsella grandiflora
Cagra.1642s0044 2.0kb downstream 2.0kb downstream 2000 false Scaffold1642: 149018-151017 Capsella grandiflora
Cagra.1642s0044 5.0kb upstream 5.0kb upstream 6291 true Scaffold1642: 142727-149017 Capsella grandiflora
Cagra.1642s0044 5.0kb upstream 5.0kb upstream 5000 false Scaffold1642: 142727-147726 Capsella grandiflora
Cagra.1642s0044 5.0kb downstream 5.0kb downstream 6291 true Scaffold1642: 147727-154017 Capsella grandiflora
Cagra.1642s0044 5.0kb downstream 5.0kb downstream 5000 false Scaffold1642: 149018-154017 Capsella grandiflora
Cagra.1642s0044 10.0kb upstream 10.0kb upstream 11291 true Scaffold1642: 137727-149017 Capsella grandiflora
Cagra.1642s0044 10.0kb upstream 10.0kb upstream 10000 false Scaffold1642: 137727-147726 Capsella grandiflora
Cagra.1642s0044 10.0kb downstream 10.0kb downstream 11291 true Scaffold1642: 147727-159017 Capsella grandiflora
Cagra.1642s0044 10.0kb downstream 10.0kb downstream 10000 false Scaffold1642: 149018-159017 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363330 5261 Brassicaceae View MSA
123832904 5264 Brassicales-Malvales View MSA
124321831 5266 SBM View MSA
124242455 5268 Malvidae View MSA
124074389 5270 Rosid View MSA
123739178 5271 Pentapetalae View MSA
122790312 5272 Eudicot View MSA
122047089 5273 Angiosperm View MSA
121344267 5274 Embryophyte View MSA
123425448 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain